From a93927e0fd03a5d6643a4837e63bc1ad66163ec9 Mon Sep 17 00:00:00 2001
From: DIANE <abderrahim.diane@cefe.cnrs.fr>
Date: Fri, 26 Apr 2024 09:21:49 +0200
Subject: [PATCH] organization of metadata
---
src/pages/1-samples_selection.py | 13 +++++--------
1 file changed, 5 insertions(+), 8 deletions(-)
diff --git a/src/pages/1-samples_selection.py b/src/pages/1-samples_selection.py
index 4e53ad1..6b5654b 100644
--- a/src/pages/1-samples_selection.py
+++ b/src/pages/1-samples_selection.py
@@ -190,17 +190,14 @@ if labels:
if isinstance(selected_samples_idx[0], str):
for i in range(len(selected_samples_idx)):
e.append(np.where(np.array(spectra.index) == selected_samples_idx[i])[0])
+ selected_s.write(e)
selected_samples_idx = list(np.array(e).reshape(-1))
-
- else:
-
-#############################################################################################################
- selected_samples_idx = selected_samples_idx
#############################
- sam = pd.DataFrame({'cluster':np.array(labels)[selected_samples_idx],
- 'index': spectra.index[selected_samples_idx]},
+ sam = pd.DataFrame({
+ 'name': spectra.index[selected_samples_idx],
+ 'cluster':np.array(labels)[selected_samples_idx]},
index = selected_samples_idx)
selected_s.write(sam)
@@ -210,7 +207,7 @@ if labels:
selected_samples_metd.write('Corresponding meta-data')
meta = meta_data.iloc[selected_samples_idx,:]
meta['cluster'] = np.array(labels)[selected_samples_idx]
- meta['index'] = spectra.index[selected_samples_idx]
+ meta['index'] = selected_samples_idx
selected_samples_metd.write(meta)
############################################################################
--
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