From fd6175bce66f5a871b599d0686bb634f744528aa Mon Sep 17 00:00:00 2001
From: Nicolas Barthes <nicolas.barthes@cnrs.fr>
Date: Wed, 14 Aug 2024 11:41:01 +0200
Subject: [PATCH] small fixes on 1-samples_selection.py (figs annotations &
default number of selected samples)
---
src/pages/1-samples_selection.py | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/src/pages/1-samples_selection.py b/src/pages/1-samples_selection.py
index b430ec5..1aed061 100644
--- a/src/pages/1-samples_selection.py
+++ b/src/pages/1-samples_selection.py
@@ -313,7 +313,7 @@ elif labels:
#### Strategy 1
case 'random':
selection_number = scores.number_input('How many samples per cluster?',
- min_value = 1, step=1, value = round(n_samples*0.1))
+ min_value = 1, step=1, value = round(n_samples*0.1/ncluster))
s = np.array(labels)[np.where(np.array(labels) !='Non clustered')[0]]
for i in np.unique(s):
C = np.where(np.array(labels) == i)[0]
@@ -496,7 +496,7 @@ if not spectra.empty:
ann = meta_data.loc[:,'name'][i]
else:
ann = t.index[i]
- fig.add_annotation(dict(x = leverage[i], y = residuals[i], showarrow=True, text = ann,font= dict(color= "black", size= 15),
+ fig.add_annotation(dict(x = leverage[i], y = residuals[i], showarrow=True, text = str(ann),font= dict(color= "black", size= 15),
xanchor = 'auto', yanchor = 'auto'))
fig.update_traces(marker=dict(size= 6), showlegend= True)
@@ -541,7 +541,7 @@ if not spectra.empty:
ann = meta_data.loc[:,'name'][i]
else:
ann = t.index[i]
- fig.add_annotation(dict(x = hotelling[i], y = residuals[i], showarrow=True, text = ann, font= dict(color= "black", size= 15),
+ fig.add_annotation(dict(x = hotelling[i], y = residuals[i], showarrow=True, text = str(ann), font= dict(color= "black", size= 15),
xanchor = 'auto', yanchor = 'auto'))
fig.update_traces(marker=dict(size= 6), showlegend= True)
@@ -605,7 +605,7 @@ if not sam.empty:
## generate report
latex_report = report.report('Representative subset selection', data_file.name, dim_red_method,
clus_method, Nb_ech, ncluster, selection, selection_number, nb_clu,tcr, sam)
-
+
@st.cache_data
def download_res(file,sam):
--
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