From 3625bfd6cfbde74db2cccfe9955a9cc9193a9d22 Mon Sep 17 00:00:00 2001
From: Juan Escobar <juan.escobar@aero.obs-mip.fr>
Date: Tue, 21 Apr 2015 08:25:58 +0000
Subject: [PATCH] Juan 21/04/2015: upgrade A-INSTALL to 5-2-0
---
A-INSTALL | 66 ++++++++++++++++++++++-----------------------
conf/profile_mesonh | 15 +++++++----
2 files changed, 43 insertions(+), 38 deletions(-)
diff --git a/A-INSTALL b/A-INSTALL
index 456299cb4..cd57d4bbb 100644
--- a/A-INSTALL
+++ b/A-INSTALL
@@ -1,8 +1,8 @@
#
# Version of PACKAGE MESONH "Open distribution"
-# PACK-MNH-V5-1-3
-# DATE : 20/11/2014
-# VERSION : MESONH MASDEV5_1 + BUG-3
+# PACK-MNH-V5-2-0
+# DATE : 21/04/2015
+# VERSION : MESONH MASDEV5_2 + BUG-0
#
# MAP
#
@@ -81,7 +81,7 @@
#
# in the field "Show files using tag:"
#
-# ---> select "PACK-MNH-V5-1-3"
+# ---> select "PACK-MNH-V5-2-0"
#
# and then download the file "PACK-MNH-VX-Y-Z.tar.gz" by the link
#
@@ -99,7 +99,7 @@ tar xvfz PACK-MNH-VX-Y-Z.tar.gz
# to the right one
#
-mv MNH-VX-Y-Z MNH-V5-1-3
+mv MNH-VX-Y-Z MNH-V5-2-0
#
# Process now to the chapter to configure the MesoNH
@@ -125,7 +125,7 @@ mv MNH-VX-Y-Z MNH-V5-1-3
#
# in the field "Show files using tag:"
#
-# ---> select "PACK-MNH-V5-1-3"
+# ---> select "PACK-MNH-V5-2-0"
#
# download the file "anoncvs.key"
#
@@ -200,19 +200,19 @@ export CVSROOT=:ext:mesonh_anoncvs_www:/home/cvsroot
# -------------------------------------
#
# Now, from your "$HOME" directory for example
-# extract the version "PACK-MNH-V5-1-3"
+# extract the version "PACK-MNH-V5-2-0"
# of the directory "MNH-VX-Y-Z" from the
# cvs repository :
cd ~
-cvs co -r PACK-MNH-V5-1-3 -d MNH-V5-1-3 MNH-VX-Y-Z
+cvs co -r PACK-MNH-V5-2-0 -d MNH-V5-2-0 MNH-VX-Y-Z
#
# WARNING : don't use a sub-directory with dot "." in the name
# ---> you could have some trouble when compiling mesonh
#
-# this will create in your "$HOME" a directory "MNH-V5-1-3"
-# which contains of the last revision named "PACK-MNH-V5-1-3"
+# this will create in your "$HOME" a directory "MNH-V5-2-0"
+# which contains of the last revision named "PACK-MNH-V5-2-0"
# of the MESONH PACKAGE
#
# The advantage of this way of downloading
@@ -222,21 +222,21 @@ cvs co -r PACK-MNH-V5-1-3 -d MNH-V5-1-3 MNH-VX-Y-Z
# to download entirely the full package
#
# Suppose that a new version for example
-# "PACK-MNH-V5-1-4" is announced ...
+# "PACK-MNH-V5-2-1" is announced ...
#
# To see the differences with your working copy
# do
#
-cd ~/MNH-V5-1-3
-cvs diff -r PACK-MNH-V5-1-4
+cd ~/MNH-V5-2-0
+cvs diff -r PACK-MNH-V5-2-1
#
# And to upgrade your working copy
#
-cd ~/MNH-V5-1-3
-cvs update -r PACK-MNH-V5-1-4 -d -P
+cd ~/MNH-V5-2-0
+cvs update -r PACK-MNH-V5-2-1 -d -P
#
# At any time you could also check for "uptodate"
@@ -251,7 +251,7 @@ cvs diff -r MNH410-BUG-branch
# ( not yet official ) version by
#
-cd ~/MNH-V5-1-3
+cd ~/MNH-V5-2-0
cvs update -r MNH410-BUG-branch -d -P
#
@@ -271,7 +271,7 @@ cvs update -r MNH410-BUG-branch -d -P
# use the "./configure" script like this
#
-cd ~/MNH-V5-1-3/src
+cd ~/MNH-V5-2-0/src
./configure
. ../conf/profile_mesonh
@@ -316,7 +316,7 @@ export OPTLEVEL=O2 # Compile in O2 , 4 time faster then DEBUG, but least
# and then source/load the new generate file
-. ../conf/profile_mesonh.LXifort.MNH-V5-1-3.MPIAUTO.O2
+. ../conf/profile_mesonh.LXifort.MNH-V5-2-0.MPIAUTO.O2
#
# REM:
@@ -341,7 +341,7 @@ export OPTLEVEL=O2 # Compile in O2 , 4 time faster then DEBUG, but least
# go to the directory "src"
#
-cd ~/MNH-V5-1-3/src
+cd ~/MNH-V5-2-0/src
#
# if you have not already configured your MESONH environment
@@ -569,8 +569,8 @@ make examples
#
cd $WORKDIR
-cvs co -r PACK-MNH-V5-1-3 -d MNH-V5-1-3 MNH-VX-Y-Z
-cd MNH-V5-1-3/src
+cvs co -r PACK-MNH-V5-2-0 -d MNH-V5-2-0 MNH-VX-Y-Z
+cd MNH-V5-2-0/src
./configure
@@ -631,7 +631,7 @@ export ARCH=LXifort
...
-création du fichier --> ../conf/profile_mesonh-LXifortI4-MNH-V5-1-3-MPICRAY-O2
+création du fichier --> ../conf/profile_mesonh-LXifortI4-MNH-V5-2-0-MPICRAY-O2
# And for the compilation & example job , switch the ARCH variable to LXiort :
@@ -639,7 +639,7 @@ vi job_make_mesonh_CRAY_cca(job_make_examples_CRAY_cca)
ARCH=LXifort
#ARCH=LXcray # this is the default one
-. ../conf/profile_mesonh-${ARCH}I4-MNH-V5-1-3-MPICRAY-O2
+. ../conf/profile_mesonh-${ARCH}I4-MNH-V5-2-0-MPICRAY-O2
@@ -730,7 +730,7 @@ scandollar
## OUTPUT ::
-># read default config file :: ---> CONF_DOLLAR=/home/escj/DEV64/PACK-MNH-V5-1-3/conf/post/confdollar_aeropc_default
+># read default config file :: ---> CONF_DOLLAR=/home/escj/DEV64/PACK-MNH-V5-2-0/conf/post/confdollar_aeropc_default
>#
># read user config file :: ---> CONFIG=confdollar
>#
@@ -752,7 +752,7 @@ scandollar 0*
## OUTPUT ::
>#
-># read default config file :: ---> CONF_DOLLAR=/home/escj/DEV64/PACK-MNH-V5-1-3/conf/post/confdollar_aeropc_default
+># read default config file :: ---> CONF_DOLLAR=/home/escj/DEV64/PACK-MNH-V5-2-0/conf/post/confdollar_aeropc_default
>#
># read user config file :: ---> CONFIG=confdollar
>#
@@ -826,22 +826,22 @@ cp -R 007_16janvier_scandollar /.../your_directory
#
# use this "profile_mesonh" :
-. /home/rech/mnh/rmnh007/DEV/MNH-V5-1-3/conf/profile_mesonh-SX8-MNH-V5-1-3-MPIAUTO-O4
+. /home/rech/mnh/rmnh007/DEV/MNH-V5-2-0/conf/profile_mesonh-SX8-MNH-V5-2-0-MPIAUTO-O4
# And the examples are here ( link to my $WORKDIR in actually )
-/home/rech/mnh/rmnh007/DEV/MNH-V5-1-3/MY_RUN/KTEST/007_16janvier_scandollar
+/home/rech/mnh/rmnh007/DEV/MNH-V5-2-0/MY_RUN/KTEST/007_16janvier_scandollar
#
# On vargas
# ---------
# use this "profile_mesonh" :
-. /workgpfs/rech/mnh/rmnh007/DEV/MNH-V5-1-3/conf/profile_mesonh-AIX64-MNH-V5-1-3-MPIAUTO-O2
+. /workgpfs/rech/mnh/rmnh007/DEV/MNH-V5-2-0/conf/profile_mesonh-AIX64-MNH-V5-2-0-MPIAUTO-O2
# and examples here :
-/workgpfs/rech/mnh/rmnh007/DEV/MNH-V5-1-3/MY_RUN/KTEST/007_16janvier_scandollar
+/workgpfs/rech/mnh/rmnh007/DEV/MNH-V5-2-0/MY_RUN/KTEST/007_16janvier_scandollar
#
# - At CINES on JADE :
@@ -849,11 +849,11 @@ cp -R 007_16janvier_scandollar /.../your_directory
#
# use
-. /work/escobar/DEV/MNH-V5-1-3/conf/profile_mesonh-LXifort-MNH-V5-1-3-MPIICE-O2
+. /work/escobar/DEV/MNH-V5-2-0/conf/profile_mesonh-LXifort-MNH-V5-2-0-MPIICE-O2
# and the exemples
-/work/escobar/DEV/MNH-V5-1-3/MY_RUN/KTEST/007_16janvier_scandollar
+/work/escobar/DEV/MNH-V5-2-0/MY_RUN/KTEST/007_16janvier_scandollar
#
# - At ECMWF on cxa :
@@ -861,11 +861,11 @@ cp -R 007_16janvier_scandollar /.../your_directory
#
# use
-. /c1a/ms_perm/au5/MNH-V5-1-3/conf/profile_mesonh-AIX64-MNH-V5-1-3-MPIAUTO-O2
+. /c1a/ms_perm/au5/MNH-V5-2-0/conf/profile_mesonh-AIX64-MNH-V5-2-0-MPIAUTO-O2
# and the examples
-/c1a/ms_perm/au5/MNH-V5-1-3/MY_RUN/KTEST/007_16janvier_scandollar
+/c1a/ms_perm/au5/MNH-V5-2-0/MY_RUN/KTEST/007_16janvier_scandollar
#
diff --git a/conf/profile_mesonh b/conf/profile_mesonh
index fb1e27621..7c383bad2 100755
--- a/conf/profile_mesonh
+++ b/conf/profile_mesonh
@@ -31,7 +31,7 @@ fi
# SRC_MESONH : default path to mesonh sources
# MUST BE SET TO YOUR OWN MESONH PATH
#
-export SRC_MESONH="/home/escj/DEV64/MNH-V5-2-0"
+export SRC_MESONH="/home/rchi421/DEV/MNH-V5-2-0"
#
# Version MESONH PACKAGE :: PACK-MNH-V5-2-0 : 15/04/2015
#
@@ -41,19 +41,19 @@ export VERSION_XYZ=MNH-V5-2-0
#
#export ARCH=LXgfortran,LXifort,LXpgi,AIX64,SX8,BGQ
#
-export ARCH=LXgfortran
+export ARCH=LXifort
#
# Version of MPI
#
#export VER_MPI=MPIVIDE,MPIAUTO,MPIICE,MPIINTEL
#
-export VER_MPI=MPIVIDE
+export VER_MPI=MPIINTEL
#
# OPTIMIZATION LEVEL
#
#export OPTLEVEL=DEBUG,O2
#
-export OPTLEVEL=DEBUG
+export OPTLEVEL=O2
#
# USER VERSION
#
@@ -65,7 +65,7 @@ export MNH_NCWRIT=
#
# 'Scandollar' Post Processing default variables
#
-export CONF_DOLLAR=/home/escj/DEV64/MNH-V5-2-0/conf/post/confdollar_aeropc_default
+export CONF_DOLLAR=/home/rchi421/DEV/MNH-V5-2-0/conf/post/confdollar_occigen_default
#
# Version of NETCDF / HDF
#
@@ -138,4 +138,9 @@ export VARTTY=`tty`
#
# Optional Environnement variable/Module Env
#
+
+ulimit -s unlimited
+module load intel/15.0.0.090
+module load intelmpi/5.0.1.035
+export SLURM_CPU_BIND=none
--
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