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GranOO is a robust and versatile workbench to build 3D dynamic simulations based on the Discrete Element Method.

Methodology to circumvent inherent flaws of repeated and falsely reported data in automatically gathered datasets via NLP methods in materials science.

Parametric patterns/shapes definition and sampling

Simple logger with a catalog of handlers

Sharing Python objects, Numpy arrays, and progress bars for Python's multiprocessing

IMGT/StatAssembly uses BAM file to assess the quality of the assembly, including order of genes and validation of alleles in IG and TR loci. Is mirrored in Github: https://github.com/IMGT-CNRS/StatAssembly