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Impact démographique des collisions aviaires avec les éoliennes
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CEFE
Interactions Humains-Animaux
Impact démographique des collisions aviaires avec les éoliennes
Commits
0dfb499f
Commit
0dfb499f
authored
3 years ago
by
thierrychambert
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(manual update) Corrected typo "time_horzion"
parent
d840c11a
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4 changed files
man/pop_project.Rd
+3
-3
3 additions, 3 deletions
man/pop_project.Rd
man/pop_project_cumulated_impacts.Rd
+3
-3
3 additions, 3 deletions
man/pop_project_cumulated_impacts.Rd
man/run_simul.Rd
+4
-4
4 additions, 4 deletions
man/run_simul.Rd
man/run_simul_shiny.Rd
+3
-3
3 additions, 3 deletions
man/run_simul_shiny.Rd
with
13 additions
and
13 deletions
man/pop_project.Rd
+
3
−
3
View file @
0dfb499f
...
...
@@ -11,7 +11,7 @@ pop_project(
f,
DD_params = NULL,
model_demo,
time_hor
z
ion,
time_hori
z
on,
coeff_var_environ,
fatal_constant = "h",
onset_time = NULL
...
...
@@ -33,7 +33,7 @@ pop_vector function.}
\item{model_demo}{an R object corresponding to the demographic model to be used. The 4 possible models currently are:
M1_noDD_noDemoStoch, M2_noDD_WithDemoStoch, M3_WithDD_noDemoStoch, M4_WithDD_WithDemoStoch,}
\item{time_hor
z
ion}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{time_hori
z
on}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{coeff_var_environ}{a number. The coefficient of variation to model environment stochasticity.}
...
...
@@ -53,7 +53,7 @@ s <- c(0.5, 0.7, 0.8, 0.95)
f <- c(0, 0, 0.05, 0.55)
N0 <- pop_vector(pop_size = 200, pop_size_type = "Npair", s, f)
pop_project(fatalities = c(0, 5, 10), intial_pop_vector = N0, s = s, f = f,
model_demo = M2_noDD_WithDemoStoch, time_hor
z
ion = 30,
model_demo = M2_noDD_WithDemoStoch, time_hori
z
on = 30,
coeff_var_environ = 0.1, fatal_constant = "h")
}
This diff is collapsed.
Click to expand it.
man/pop_project_cumulated_impacts.Rd
+
3
−
3
View file @
0dfb499f
...
...
@@ -12,7 +12,7 @@ pop_project_cumulated_impacts(
f,
DD_params,
model_demo,
time_hor
z
ion,
time_hori
z
on,
coeff_var_environ,
fatal_constant = "h"
)
...
...
@@ -35,7 +35,7 @@ pop_vector function.}
\item{model_demo}{an R object corresponding to the demographic model to be used. The 4 possible models currently are:
M1_noDD_noDemoStoch, M2_noDD_WithDemoStoch, M3_WithDD_noDemoStoch, M4_WithDD_WithDemoStoch,}
\item{time_hor
z
ion}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{time_hori
z
on}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{coeff_var_environ}{a number. The coefficient of variation to model environment stochasticity.}
...
...
@@ -53,7 +53,7 @@ s <- c(0.5, 0.7, 0.8, 0.95)
f <- c(0, 0, 0.05, 0.55)
N0 <- pop_vector(pop_size = 200, pop_size_type = "Npair", s, f)
pop_project(fatalities = c(0, 5, 10), intial_pop_vector = N0, s = s, f = f,
model_demo = M2_noDD_WithDemoStoch, time_hor
z
ion = 30,
model_demo = M2_noDD_WithDemoStoch, time_hori
z
on = 30,
coeff_var_environ = 0.1, fatal_constant = "h")
}
This diff is collapsed.
Click to expand it.
man/run_simul.Rd
+
4
−
4
View file @
0dfb499f
...
...
@@ -21,7 +21,7 @@ run_simul(
theta = 1,
rMAX_species,
model_demo = NULL,
time_hor
z
ion,
time_hori
z
on,
coeff_var_environ,
fatal_constant
)
...
...
@@ -73,7 +73,7 @@ base on the values of N0 and lam0 that are drawn.
But it can be forced by setting the value, which must then be an R object corresponding to the demographic model to be used.
The 4 possible models currently are: M1_noDD_noDemoStoch, M2_noDD_WithDemoStoch, M3_WithDD_noDemoStoch, M4_WithDD_WithDemoStoch,}
\item{time_hor
z
ion}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{time_hori
z
on}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{coeff_var_environ}{a number. The coefficient of variation to model environment stochasticity.}
...
...
@@ -103,7 +103,7 @@ survivals <- c(0.5, 0.7, 0.8, 0.95)
fecundities <- c(0, 0, 0.05, 0.55)
time_hor
z
ion = 30
time_hori
z
on = 30
coeff_var_environ = 0.10
fatal_constant = "h"
...
...
@@ -118,7 +118,7 @@ run_simul(nsim = 10, cumulated_impacts = FALSE,
survivals, fecundities,
carrying_capacity, theta,
rMAX_species,
model_demo = NULL, time_hor
z
ion, coeff_var_environ, fatal_constant)
model_demo = NULL, time_hori
z
on, coeff_var_environ, fatal_constant)
}
This diff is collapsed.
Click to expand it.
man/run_simul_shiny.Rd
+
3
−
3
View file @
0dfb499f
...
...
@@ -23,7 +23,7 @@ run_simul_shiny(
theta = 1,
rMAX_species,
model_demo = NULL,
time_hor
z
ion,
time_hori
z
on,
coeff_var_environ,
fatal_constant
)
...
...
@@ -68,14 +68,14 @@ It can be calculated using the function rMAX_spp. See ?rMAX_spp for details.
References :
Niel, C., and J. Lebreton. 2005. Using demographic invariants to detect overharvested bird
populations from incomplete data. Conservation Biology 19:826
–
835.}
populations from incomplete data. Conservation Biology 19:826
-
835.}
\item{model_demo}{is NULL, by default, because the model choice will be made inside each iteration (simulation),
base on the values of N0 and lam0 that are drawn.
But it can be forced by setting the value, which must then be an R object corresponding to the demographic model to be used.
The 4 possible models currently are: M1_noDD_noDemoStoch, M2_noDD_WithDemoStoch, M3_WithDD_noDemoStoch, M4_WithDD_WithDemoStoch,}
\item{time_hor
z
ion}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{time_hori
z
on}{a number. The number of years (time horizon) over which to project the population dynamics.}
\item{coeff_var_environ}{a number. The coefficient of variation to model environment stochasticity.}
...
...
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