Merge branch 'master' of https://src.koda.cnrs.fr/cefe/pace/nirs_workflow

src/Packages.py

@@ -26,7 +26,7 @@ from scipy.sparse.csgraph import minimum_spanning_tree
 from scipy.sparse import csgraph
 
 # Modelling
-from juliacall import Main as jl
+#from juliacall import Main as jl
 
 from pinard import utils
 from pinard import preprocessing as pp

src/pages/1-samples_selection.py

@@ -241,9 +241,35 @@ if not t.empty:
         plt.savefig("./Report/Figures/test.png")
         st.plotly_chart(fig, use_container_width=True)
 
+        import plotly.express as px
+
+        if labels:
+            num_clusters = len(np.unique(labels))
+
+            custom_color_palette = px.colors.qualitative.Plotly[:num_clusters]
+            color_discrete_sequence=custom_color_palette
+
+            # Créer et exporter le graphique Axe1-Axe2 en PNG
+            fig_axe1_axe2 = px.scatter(tcr, x=axis1, y=axis2, color=labels if list(labels) else None, color_discrete_sequence=custom_color_palette)
+            fig_axe1_axe2.update_layout(title='Axe1-Axe2')
+            fig_axe1_axe2.update_traces(marker=dict(size=4))
+            fig_axe1_axe2.write_image("./Report/Figures/plot_axe1_axe2.png")
+
+
+            # Créer et exporter le graphique Axe1-Axe3 en PNG
+            fig_axe1_axe3 = px.scatter(tcr, x=axis1, y=axis3, color=labels if list(labels) else None, color_discrete_sequence=custom_color_palette)
+            fig_axe1_axe3.update_layout(title='Axe1-Axe3')
+            fig_axe1_axe3.update_traces(marker=dict(size=4))
+            fig_axe1_axe3.write_image("./Report/Figures/plot_axe1_axe3.png")
+
+
+            # Créer et exporter le graphique Axe2-Axe3 en PNG
+            fig_axe2_axe3 = px.scatter(tcr, x=axis2, y=axis3, color=labels if list(labels) else None, color_discrete_sequence=custom_color_palette)
+            fig_axe2_axe3.update_layout(title='Axe2-Axe3')
+            fig_axe2_axe3.update_traces(marker=dict(size=4))
+            fig_axe2_axe3.write_image("./Report/Figures/plot_axe2_axe3.png")
 
 
-#################################################################
 if not spectra.empty:
     if dim_red_method == dim_red_methods[1]:
 

src/pages/4-inputs.py

 import streamlit as st
 
-
+from Packages import *
+st.set_page_config(page_title="NIRS Utils", page_icon=":goat:", layout="wide",)
+if 'interface' not in st.session_state:
+    st.session_state['interface'] = 'simple'
+from Modules import *
+from Class_Mod.DATA_HANDLING import *
 # HTML for the banner "CEFE - CNRS"
 # bandeau_html = """
 # <div style="width: 100%; background-color: #4682B4; padding: 10px; margin-bottom: 10px;">
@@ -28,7 +33,7 @@ with st.container():
         .stButton>button {
             display: block;
             margin: 0 auto;
-            width: 200px;
+            width: 200px;  
             height: 50px;
             font-size: 16px;
         }