Commits · 5679e49eab482674ab72c5207fe273eafc78884e · CEFE / PACE / NIRS_Workflow

Apr 18, 2024
- Beginning of Documentation via DocStrings · 5679e49e
  Nicolas Barthes authored 11 months ago
  
  5679e49e
- reformated home page · d9f3b203
  Nicolas Barthes authored 11 months ago
  
  d9f3b203
- creation of src and docs folders for mkdocs documentation · 840c4073
  Nicolas Barthes authored 11 months ago
  
  840c4073
Apr 17, 2024
- remove temp figs from source · 07d70fba
  BARTHES Nicolas authored 11 months ago
  
  07d70fba
- Merge remote-tracking branch 'origin/master' · 9f14e4ed
  BARTHES Nicolas authored 11 months ago
  
  9f14e4ed
- beginning of lwPlsr - Julia Jchemo · 063ac998
  BARTHES Nicolas authored 11 months ago
  
  063ac998
- Merge · 4290a3e9
  DIANE authored 11 months ago
  
  4290a3e9
- Merge branch 'master' of https://src.koda.cnrs.fr/cefe/pace/nirs_workflow · a009fab4
  DIANE authored 11 months ago
  
  a009fab4
- samples_selection: · a3c30c9f
  DIANE authored 11 months ago
  
  - export samples for wet-chem analysis - export metadata if it exists - color selected samples on scores plot
  a3c30c9f
- Test · cf32248c
  Mouhcine authored 11 months ago
  
  cf32248c
- Export des graphes vers report · 7f809eaa
  Mouhcine authored 11 months ago
  
  7f809eaa
- Merge branch 'master' of https://src.koda.cnrs.fr/cefe/pace/nirs_workflow · 7a45f9f3
  Mouhcine authored 11 months ago
  
  7a45f9f3
- Ajout de l'export des fiigures pour le rapport · a04da788
  Mouhcine authored 11 months ago
  
  a04da788
Apr 16, 2024
- HDBSCAN working with metadata & supervised UMAP + fixed widget width · 3461d3b0
  BARTHES Nicolas authored 11 months ago
  
  3461d3b0
- supervised UMAP working with metadata · c1ef0d45
  BARTHES Nicolas authored 11 months ago
  
  c1ef0d45
- added meta_data to csv files · 8ad6a010
  BARTHES Nicolas authored 11 months ago
  
  8ad6a010
- added meta_data to csv files · d0da2947
  BARTHES Nicolas authored 11 months ago
  
  d0da2947
- Merge remote-tracking branch 'origin/master' · cca17c92
  BARTHES Nicolas authored 11 months ago
  
  cca17c92
- updated col_cat function from DATA_HANDLING.py. Outputs are now comparable to those of dr_reader · 21546763
  BARTHES Nicolas authored 11 months ago
  
  21546763
- prediction from .dx file · 1fbccb45
  DIANE authored 11 months ago
  
  1fbccb45
- NaN values in .dx · 41e614bc
  DIANE authored 11 months ago
  
  41e614bc
Apr 15, 2024
- added data with categories and duplicated Xcal up to 1000 samples to test upscaling. · a3d36997
  Nicolas Barthes authored 11 months ago
  
  a3d36997
- Merge remote-tracking branch 'origin/master' · 1b115462
  Nicolas Barthes authored 11 months ago
  
  # Conflicts: # Class_Mod/UMAP_.py # Class_Mod/__init__.py # Modules.py # Packages.py # pages/1-samples_selection.py
  1b115462
- updated HDBSCAN becomes a class and supervised UMAP · f98b67f8
  Nicolas Barthes authored 11 months ago
  
  f98b67f8
- model creation from dx · 9c513852
  DIANE authored 11 months ago
  
  9c513852
- samples selection · 41be0373
  DIANE authored 11 months ago
  
  41be0373
- clusters name · 34dfdae4
  DIANE authored 11 months ago
  
  34dfdae4
- score plot(group samples based on metadata or on clustering results · 6894c76a
  DIANE authored 11 months ago
  
  6894c76a
- color filters · 8915f27a
  DIANE authored 11 months ago
  
  8915f27a
Apr 12, 2024
- Merge branch 'master' of https://src.koda.cnrs.fr/cefe/pace/nirs_workflow · 965f7e42
  DIANE authored 11 months ago
  
  965f7e42
- code readability and complexity were enhanced · 023dfa7d
  DIANE authored 11 months ago
  
  modifications were incorporated
  023dfa7d
- updated HDBSCAN optimization · 4b97a50f
  Nicolas Barthes authored 11 months ago
  
  4b97a50f
- updated README.md · 8b9d04d7
  Nicolas Barthes authored 11 months ago
  
  8b9d04d7
- moved HDBSCAN function · e4b947d5
  Nicolas Barthes authored 11 months ago
  
  e4b947d5
- added simple/advanced Interface · 1cc1a75a
  Nicolas Barthes authored 11 months ago
  
  1cc1a75a
Apr 11, 2024
- Merge remote-tracking branch 'origin/master' · 19757ac9
  BARTHES Nicolas authored 11 months ago
  
  # Conflicts: # pages/1-samples_selection.py
  19757ac9
- added HDBSCAN clustering with optimization · 90d465b1
  BARTHES Nicolas authored 11 months ago
  
  90d465b1
- added HDBSCAN clustering with optimization · edd165e7
  BARTHES Nicolas authored 11 months ago
  
  edd165e7
- PCA color filter · f71a2342
  DIANE authored 11 months ago
  
  prediction using ipls model
  f71a2342
- Add new directory · 05f3b896
  DIANE Abderrahim authored 11 months ago
  
  05f3b896