Commits · a3c30c9fbc06ea78aef9417a9f1cc52cd7520fe1 · CEFE / PACE / NIRS_Workflow

Apr 17, 2024

DIANE authored 11 months ago

- export samples for wet-chem analysis
- export metadata if it exists
- color selected samples on scores plot

a3c30c9f

Apr 16, 2024
- added meta_data to csv files · 8ad6a010
  BARTHES Nicolas authored 11 months ago
  
  8ad6a010
- added meta_data to csv files · d0da2947
  BARTHES Nicolas authored 11 months ago
  
  d0da2947
- Merge remote-tracking branch 'origin/master' · cca17c92
  BARTHES Nicolas authored 11 months ago
  
  cca17c92
- updated col_cat function from DATA_HANDLING.py. Outputs are now comparable to those of dr_reader · 21546763
  BARTHES Nicolas authored 11 months ago
  
  21546763
- prediction from .dx file · 1fbccb45
  DIANE authored 11 months ago
  
  1fbccb45
- NaN values in .dx · 41e614bc
  DIANE authored 11 months ago
  
  41e614bc
Apr 15, 2024
- added data with categories and duplicated Xcal up to 1000 samples to test upscaling. · a3d36997
  Nicolas Barthes authored 11 months ago
  
  a3d36997
- Merge remote-tracking branch 'origin/master' · 1b115462
  Nicolas Barthes authored 11 months ago
  
  # Conflicts: # Class_Mod/UMAP_.py # Class_Mod/__init__.py # Modules.py # Packages.py # pages/1-samples_selection.py
  1b115462
- updated HDBSCAN becomes a class and supervised UMAP · f98b67f8
  Nicolas Barthes authored 11 months ago
  
  f98b67f8
- model creation from dx · 9c513852
  DIANE authored 11 months ago
  
  9c513852
- samples selection · 41be0373
  DIANE authored 11 months ago
  
  41be0373
- clusters name · 34dfdae4
  DIANE authored 11 months ago
  
  34dfdae4
- score plot(group samples based on metadata or on clustering results · 6894c76a
  DIANE authored 11 months ago
  
  6894c76a
- color filters · 8915f27a
  DIANE authored 11 months ago
  
  8915f27a
Apr 12, 2024
- Merge branch 'master' of https://src.koda.cnrs.fr/cefe/pace/nirs_workflow · 965f7e42
  DIANE authored 11 months ago
  
  965f7e42
- code readability and complexity were enhanced · 023dfa7d
  DIANE authored 11 months ago
  
  modifications were incorporated
  023dfa7d
- updated HDBSCAN optimization · 4b97a50f
  Nicolas Barthes authored 11 months ago
  
  4b97a50f
- updated README.md · 8b9d04d7
  Nicolas Barthes authored 11 months ago
  
  8b9d04d7
- moved HDBSCAN function · e4b947d5
  Nicolas Barthes authored 11 months ago
  
  e4b947d5
- added simple/advanced Interface · 1cc1a75a
  Nicolas Barthes authored 11 months ago
  
  1cc1a75a
Apr 11, 2024
- Merge remote-tracking branch 'origin/master' · 19757ac9
  BARTHES Nicolas authored 11 months ago
  
  # Conflicts: # pages/1-samples_selection.py
  19757ac9
- added HDBSCAN clustering with optimization · 90d465b1
  BARTHES Nicolas authored 11 months ago
  
  90d465b1
- added HDBSCAN clustering with optimization · edd165e7
  BARTHES Nicolas authored 11 months ago
  
  edd165e7
- PCA color filter · f71a2342
  DIANE authored 11 months ago
  
  prediction using ipls model
  f71a2342
- Add new directory · 05f3b896
  DIANE Abderrahim authored 11 months ago
  
  05f3b896
- Add new directory · e90c1404
  DIANE Abderrahim authored 11 months ago
  
  e90c1404
- Add new directory · 5f45350d
  DIANE Abderrahim authored 11 months ago
  
  5f45350d
- samples_selection · df8fb941
  DIANE authored 11 months ago
  
  df8fb941
- var sell · 99c3c0c9
  DIANE authored 11 months ago
  
  99c3c0c9
Apr 10, 2024
- Dx · 5033bc4c
  DIANE authored 11 months ago
  
  5033bc4c
- - Wavelength selection successfully incorporated · 6718fc6f
  DIANE authored 11 months ago
  
  - Modifications on Model creation pages - correction of regression metrics
  6718fc6f
Apr 09, 2024
- Merge remote-tracking branch 'origin/master' · 8df9593c
  Nicolas Barthes authored 11 months ago
  
  8df9593c
- updated .bib refs · 46a07e84
  Nicolas Barthes authored 11 months ago
  
  46a07e84
- Merge branch 'master' of https://src.koda.cnrs.fr/cefe/pace/nirs_workflow · d65e8974
  DIANE authored 11 months ago
  
  d65e8974
- dx file load · 0bfc99f9
  DIANE authored 11 months ago
  
  0bfc99f9
Apr 08, 2024
- added LaTEX template and function for PDF report · 826b619c
  Nicolas Barthes authored 11 months ago
  
  826b619c
- Merge remote-tracking branch 'origin/master' · 6dec0081
  Nicolas Barthes authored 11 months ago
  
  6dec0081
- added LaTEX template and function for PDF report · 7966c567
  Nicolas Barthes authored 11 months ago
  
  7966c567
Apr 05, 2024
- Merge branch 'master' of https://src.koda.cnrs.fr/nicolas.barthes.5/nirs_workflow · 5a56913d
  DIANE authored 11 months ago
  
  5a56913d