MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/002_prep_pgd2/PRE_PGD1.nam

+&NAM_CONFIO LCDF4=.TRUE.,
+            LLFIOUT=.FALSE.,
+            LLFIREAD=.FALSE. /
+
+&NAM_INIFILE_CONF_PROJ IXOR=23,
+                       IYOR=23,
+                       IXSIZE=15,
+                       IYSIZE=15,
+                       IDXRATIO=4,
+                       IDYRATIO=4  /
+
+&NAM_PGD_GRID YINIFILE='BIOMAIDO_CH_8km',
+              YINIFILETYPE='MESONH' /
+
+&NAM_PGDFILE CPGDFILE='BIOMAIDO_CH_2km', NHALO= 0 /
+
+&NAM_CONF_PROJ_GRID /
+
+&NAM_COVER YCOVER='ECOCLIMAP_v2.0',
+           YCOVERFILETYPE='DIRECT' /
+
+&NAM_ZS YZS='gtopo30',
+        YZSFILETYPE='DIRECT' /
+
+&NAM_ISBA CPHOTO='NIT',
+          YCLAY='CLAY_HWSD_MOY_v2',
+          YCLAYFILETYPE='DIRECT',
+          YSAND='SAND_HWSD_MOY_v2',
+          YSANDFILETYPE='DIRECT',
+          CISBA ="3-L",
+          NPATCH=12 /
+
+&NAM_CH_EMISSIONS CCH_EMIS = 'AGGR', CCH_BIOEMIS = 'MEGA', CCH_DMSEMIS= 'DMSD' /
+
+&NAM_DMS_PGD    NDMS_NBR = 12,
+                CDMS_NAME(1) = 'DMS_JAN',
+                CDMS_FILE(1) = 'data_DMS_january.dat',
+                CDMS_FILETYPE(1) = 'ASCLLV',
+                CDMS_AREA(1) = 'SEA',
+                CDMS_NAME(2) = 'DMS_FEV',
+                CDMS_FILE(2) = 'data_DMS_february.dat',
+                CDMS_FILETYPE(2) = 'ASCLLV',
+                CDMS_AREA(2) = 'SEA',
+                CDMS_NAME(3) = 'DMS_MAR',
+                CDMS_FILE(3) = 'data_DMS_march.dat',
+                CDMS_FILETYPE(3) = 'ASCLLV',
+                CDMS_AREA(3) = 'SEA',
+                CDMS_NAME(4) = 'DMS_APR',
+                CDMS_FILE(4) = 'data_DMS_april.dat',
+                CDMS_FILETYPE(4) = 'ASCLLV',
+                CDMS_AREA(4) = 'SEA',
+                CDMS_NAME(5) = 'DMS_MAY',
+                CDMS_FILE(5) = 'data_DMS_may.dat',
+                CDMS_FILETYPE(5) = 'ASCLLV',
+                CDMS_AREA(5) = 'SEA',
+                CDMS_NAME(6) = 'DMS_JUN',
+                CDMS_FILE(6) = 'data_DMS_june.dat',
+                CDMS_FILETYPE(6) = 'ASCLLV',
+                CDMS_AREA(6) = 'SEA',
+                CDMS_NAME(7) = 'DMS_JUL',
+                CDMS_FILE(7) = 'data_DMS_july.dat',
+                CDMS_FILETYPE(7) = 'ASCLLV',
+                CDMS_AREA(7) = 'SEA',
+                CDMS_NAME(8) = 'DMS_AUG',
+                CDMS_FILE(8) = 'data_DMS_august.dat',
+                CDMS_FILETYPE(8) = 'ASCLLV',
+                CDMS_AREA(9) = 'SEA',
+                CDMS_NAME(9) = 'DMS_SEP',
+                CDMS_FILE(9) = 'data_DMS_september.dat',
+                CDMS_FILETYPE(9) = 'ASCLLV',
+                CDMS_AREA(10) = 'SEA',
+                CDMS_NAME(10) = 'DMS_OCT',
+                CDMS_FILE(10) = 'data_DMS_october.dat',
+                CDMS_FILETYPE(10) = 'ASCLLV',
+                CDMS_AREA(11) = 'SEA',
+                CDMS_NAME(11) = 'DMS_NOV',
+                CDMS_FILE(11) = 'data_DMS_november.dat',
+                CDMS_FILETYPE(11) = 'ASCLLV',
+                CDMS_AREA(11) = 'SEA',
+                CDMS_NAME(12) = 'DMS_DEC',
+                CDMS_FILE(12) = 'data_DMS_december.dat',
+                CDMS_FILETYPE(12) = 'ASCLLV',
+                CDMS_AREA(12) = 'SEA' /
+
+
+&NAM_CH_EMIS_PGD    NEMIS_PGD_NBR = 38, 
+                    CEMIS_PGD_NAME(1) = 'COAN',
+                    NEMIS_PGD_TIME(1) = 0,
+                    CEMIS_PGD_FILE(1) = 'MACCity_CO_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(1) = 'ASCLLV',
+                    CEMIS_PGD_AREA(1) = 'LAN',
+                    CEMIS_PGD_NAME(2) = 'NOXAN',
+                    NEMIS_PGD_TIME(2) = 0,
+                    CEMIS_PGD_FILE(2) = 'MACCity_NOX_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(2) = 'ASCLLV',
+                    CEMIS_PGD_AREA(2) = 'LAN',
+                    CEMIS_PGD_NAME(3) = 'C2H6AN',
+                    NEMIS_PGD_TIME(3) = 0,
+                    CEMIS_PGD_FILE(3) = 'MACCity_C2H6_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(3) = 'ASCLLV',
+                    CEMIS_PGD_AREA(3) = 'LAN',
+                    CEMIS_PGD_NAME(4) = 'C2H4AN',
+                    NEMIS_PGD_TIME(4) = 0,
+                    CEMIS_PGD_FILE(4) = 'MACCity_C2H4_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(4) = 'ASCLLV',
+                    CEMIS_PGD_AREA(4) = 'LAN',
+                    CEMIS_PGD_NAME(5) = 'C3H8AN',
+                    NEMIS_PGD_TIME(5) = 0,
+                    CEMIS_PGD_FILE(5) = 'MACCity_C3H8_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(5) = 'ASCLLV',
+                    CEMIS_PGD_AREA(5) = 'LAN',
+                    CEMIS_PGD_NAME(6) = 'C3H6AN',
+                    NEMIS_PGD_TIME(6) = 0,
+                    CEMIS_PGD_FILE(6) = 'MACCity_C3H6_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(6) = 'ASCLLV',
+                    CEMIS_PGD_AREA(6) = 'LAN',
+                    CEMIS_PGD_NAME(7) = 'BALKAN',
+                    NEMIS_PGD_TIME(7) = 0,
+                    CEMIS_PGD_FILE(7) = 'MACCity_BIGALK_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(7) = 'ASCLLV',
+                    CEMIS_PGD_AREA(7) = 'LAN',
+                    CEMIS_PGD_NAME(8) = 'BENEAN',
+                    NEMIS_PGD_TIME(8) = 0,
+                    CEMIS_PGD_FILE(8) = 'MACCity_BIGENE_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(8) = 'ASCLLV',
+                    CEMIS_PGD_AREA(8) = 'LAN',
+                    CEMIS_PGD_NAME(9) = 'CH2OAN',
+                    NEMIS_PGD_TIME(9) = 0,
+                    CEMIS_PGD_FILE(9) = 'MACCity_CH2O_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(9) = 'ASCLLV',
+                    CEMIS_PGD_AREA(9) = 'LAN',
+                    CEMIS_PGD_NAME(10) = 'BALDAN',
+                    NEMIS_PGD_TIME(10) = 0,
+                    CEMIS_PGD_FILE(10) = 'MACCity_BIGALD_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(10) = 'ASCLLV',
+                    CEMIS_PGD_AREA(10) = 'LAN',
+                    CEMIS_PGD_NAME(11) = 'MTOLAN',
+                    NEMIS_PGD_TIME(11) = 0,
+                    CEMIS_PGD_FILE(11) = 'MACCity_CH3OH_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(11) = 'ASCLLV',
+                    CEMIS_PGD_AREA(11) = 'LAN',
+                    CEMIS_PGD_NAME(12) = 'BOLAN',
+                    NEMIS_PGD_TIME(12) = 0,
+                    CEMIS_PGD_FILE(12) = 'MACCity_BIGOL_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(12) = 'ASCLLV',
+                    CEMIS_PGD_AREA(12) = 'LAN',
+                    CEMIS_PGD_NAME(13) = 'ACETAN',
+                    NEMIS_PGD_TIME(13) = 0,
+                    CEMIS_PGD_FILE(13) = 'MACCity_ACETONE_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(13) = 'ASCLLV',
+                    CEMIS_PGD_AREA(13) = 'LAN',
+                    CEMIS_PGD_NAME(14) = 'BONEAN',
+                    NEMIS_PGD_TIME(14) = 0,
+                    CEMIS_PGD_FILE(14) = 'MACCity_BIGONE_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(14) = 'ASCLLV',
+                    CEMIS_PGD_AREA(14) = 'LAN',
+                    CEMIS_PGD_NAME(15) = 'AROAN',
+                    NEMIS_PGD_TIME(15) = 0,
+                    CEMIS_PGD_FILE(15) = 'MACCity_ARO_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(15) = 'ASCLLV',
+                    CEMIS_PGD_AREA(15) = 'LAN',
+                    CEMIS_PGD_NAME(16) = 'SO2AN',
+                    NEMIS_PGD_TIME(16) = 0,
+                    CEMIS_PGD_FILE(16) = 'MACCity_SO2_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(16) = 'ASCLLV',
+                    CEMIS_PGD_AREA(16) = 'LAN',
+                    NEMIS_PGD_TIME(17) = 0,
+                    CEMIS_PGD_NAME(17) = 'NH3AN',
+                    CEMIS_PGD_FILE(17) = 'MACCity_NH3_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(17) = 'ASCLLV',
+                    CEMIS_PGD_AREA(17) = 'LAN',
+                    CEMIS_PGD_NAME(18) = 'BCAN',
+                    NEMIS_PGD_TIME(18) = 0,
+                    CEMIS_PGD_FILE(18) = 'MACCity_BC_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(18) = 'ASCLLV',
+                    CEMIS_PGD_AREA(18) = 'LAN',
+                    CEMIS_PGD_NAME(19) = 'OCAN',
+                    NEMIS_PGD_TIME(19) = 0,
+                    CEMIS_PGD_FILE(19) = 'MACCity_OC_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(19) = 'ASCLLV',
+                    CEMIS_PGD_AREA(19) = 'LAN',
+                    CEMIS_PGD_NAME(20) = 'COANSEA',
+                    NEMIS_PGD_TIME(20) = 0,
+                    CEMIS_PGD_FILE(20) = 'MACCity_CO_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(20) = 'ASCLLV',
+                    CEMIS_PGD_AREA(20) = 'SEA',
+                    CEMIS_PGD_NAME(21) = 'NOXANSEA',
+                    NEMIS_PGD_TIME(21) = 0,
+                    CEMIS_PGD_FILE(21) = 'MACCity_NOX_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(21) = 'ASCLLV',
+                    CEMIS_PGD_AREA(21) = 'SEA',
+                    CEMIS_PGD_NAME(22) = 'C2H6ANSEA',
+                    NEMIS_PGD_TIME(22) = 0,
+                    CEMIS_PGD_FILE(22) = 'MACCity_C2H6_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(22) = 'ASCLLV',
+                    CEMIS_PGD_AREA(22) = 'SEA',
+                    CEMIS_PGD_NAME(23) = 'C2H4ANSEA',
+                    NEMIS_PGD_TIME(23) = 0,
+                    CEMIS_PGD_FILE(23) = 'MACCity_C2H4_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(23) = 'ASCLLV',
+                    CEMIS_PGD_AREA(23) = 'SEA',
+                    CEMIS_PGD_NAME(24) = 'C3H8ANSEA',
+                    NEMIS_PGD_TIME(24) = 0,
+                    CEMIS_PGD_FILE(24) = 'MACCity_C3H8_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(24) = 'ASCLLV',
+                    CEMIS_PGD_AREA(24) = 'SEA',
+                    CEMIS_PGD_NAME(25) = 'C3H6ANSEA',
+                    NEMIS_PGD_TIME(25) = 0,
+                    CEMIS_PGD_FILE(25) = 'MACCity_C3H6_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(25) = 'ASCLLV',
+                    CEMIS_PGD_AREA(25) = 'SEA',
+                    CEMIS_PGD_NAME(26) = 'BALKANSEA',
+                    NEMIS_PGD_TIME(26) = 0,
+                    CEMIS_PGD_FILE(26) = 'MACCity_BIGALK_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(26) = 'ASCLLV',
+                    CEMIS_PGD_AREA(26) = 'SEA',
+                    CEMIS_PGD_NAME(27) = 'BENEANSEA',
+                    NEMIS_PGD_TIME(27) = 0,
+                    CEMIS_PGD_FILE(27) = 'MACCity_BIGENE_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(27) = 'ASCLLV',
+                    CEMIS_PGD_AREA(27) = 'SEA',
+                    CEMIS_PGD_NAME(28) = 'CH2OANSEA',
+                    NEMIS_PGD_TIME(28) = 0,
+                    CEMIS_PGD_FILE(28) = 'MACCity_CH2O_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(28) = 'ASCLLV',
+                    CEMIS_PGD_AREA(28) = 'SEA',
+                    CEMIS_PGD_NAME(29) = 'BALDANSEA',
+                    NEMIS_PGD_TIME(29) = 0,
+                    CEMIS_PGD_FILE(29) = 'MACCity_BIGALD_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(29) = 'ASCLLV',
+                    CEMIS_PGD_AREA(29) = 'SEA',
+                    CEMIS_PGD_NAME(30) = 'MTOLANSEA',
+                    NEMIS_PGD_TIME(30) = 0,
+                    CEMIS_PGD_FILE(30) = 'MACCity_CH3OH_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(30) = 'ASCLLV',
+                    CEMIS_PGD_AREA(30) = 'SEA',
+                    CEMIS_PGD_NAME(31) = 'BOLANSEA',
+                    NEMIS_PGD_TIME(31) = 0,
+                    CEMIS_PGD_FILE(31) = 'MACCity_BIGOL_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(31) = 'ASCLLV',
+                    CEMIS_PGD_AREA(31) = 'SEA',
+                    CEMIS_PGD_NAME(32) = 'ACETANSEA',
+                    NEMIS_PGD_TIME(32) = 0,
+                    CEMIS_PGD_FILE(32) = 'MACCity_ACETONE_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(32) = 'ASCLLV',
+                    CEMIS_PGD_AREA(32) = 'SEA',
+                    CEMIS_PGD_NAME(33) = 'BONEANSEA',
+                    NEMIS_PGD_TIME(33) = 0,
+                    CEMIS_PGD_FILE(33) = 'MACCity_BIGONE_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(33) = 'ASCLLV',
+                    CEMIS_PGD_AREA(33) = 'SEA',
+                    CEMIS_PGD_NAME(34) = 'AROANSEA',
+                    NEMIS_PGD_TIME(34) = 0,
+                    CEMIS_PGD_FILE(34) = 'MACCity_ARO_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(34) = 'ASCLLV',
+                    CEMIS_PGD_AREA(34) = 'SEA',
+                    CEMIS_PGD_NAME(35) = 'SO2ANSEA',
+                    NEMIS_PGD_TIME(35) = 0,
+                    CEMIS_PGD_FILE(35) = 'MACCity_SO2_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(35) = 'ASCLLV',
+                    CEMIS_PGD_AREA(35) = 'SEA',
+                    CEMIS_PGD_NAME(36) = 'NH3ANSEA',
+                    NEMIS_PGD_TIME(36) = 0,
+                    CEMIS_PGD_FILE(36) = 'MACCity_NH3_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(36) = 'ASCLLV',
+                    CEMIS_PGD_AREA(36) = 'SEA',
+                    CEMIS_PGD_NAME(37) = 'BCANSEA',
+                    NEMIS_PGD_TIME(37) = 0,
+                    CEMIS_PGD_FILE(37) = 'MACCity_BC_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(37) = 'ASCLLV',
+                    CEMIS_PGD_AREA(37) = 'SEA',
+                    CEMIS_PGD_NAME(38) = 'OCANSEA',
+                    NEMIS_PGD_TIME(38) = 0,
+                    CEMIS_PGD_FILE(38) = 'MACCity_OC_juil2014.asc',
+                    CEMIS_PGD_FILETYPE(38) = 'ASCLLV',
+                    CEMIS_PGD_AREA(38) = 'SEA' /
+
+&NAM_MEGAN_PGD    NMEGAN_NBR = 15,
+                  CMEGAN_NAME(1) = 'EFISOP',
+                  CMEGAN_FILE(1) = 'isop100.asc',
+                  CMEGAN_FILETYPE(1) = 'ASCLLV',
+                  CMEGAN_AREA(1) = 'LAN',
+                  CMEGAN_NAME(2) = 'EFAPIN',
+                  CMEGAN_FILE(2) = 'apin100.asc',
+                  CMEGAN_FILETYPE(2) = 'ASCLLV',
+                  CMEGAN_AREA(2) = 'LAN',
+                  CMEGAN_NAME(3) = 'EFBPIN',
+                  CMEGAN_FILE(3) = 'bpin100.asc',
+                  CMEGAN_FILETYPE(3) = 'ASCLLV',
+                  CMEGAN_AREA(3) = 'LAN',
+                  CMEGAN_NAME(4) = 'EFCARE',
+                  CMEGAN_FILE(4) = 'bcar100.asc',
+                  CMEGAN_FILETYPE(4) = 'ASCLLV',
+                  CMEGAN_AREA(4) = 'LAN',
+                  CMEGAN_NAME(5) = 'EFLIMO',
+                  CMEGAN_FILE(5) = 'limo100.asc',
+                  CMEGAN_FILETYPE(5) = 'ASCLLV',
+                  CMEGAN_AREA(5) = 'LAN',
+                  CMEGAN_NAME(6) = 'EFMYRC',
+                  CMEGAN_FILE(6) = 'myrc100.asc',
+                  CMEGAN_FILETYPE(6) = 'ASCLLV',
+                  CMEGAN_AREA(6) = 'LAN',
+                  CMEGAN_NAME(7) = 'EFOCIM',
+                  CMEGAN_FILE(7) = 'ocim100.asc',
+                  CMEGAN_FILETYPE(7) = 'ASCLLV',
+                  CMEGAN_AREA(7) = 'LAN',
+                  CMEGAN_NAME(8) = 'EFSABI',
+                  CMEGAN_FILE(8) = 'sabi100.asc',
+                  CMEGAN_FILETYPE(8) = 'ASCLLV',
+                  CMEGAN_AREA(8) = 'LAN',
+                  CMEGAN_NAME(10) = 'LAI',
+                  CMEGAN_FILE(10) = 'lai100.asc',
+                  CMEGAN_FILETYPE(10) = 'ASCLLV',
+                  CMEGAN_AREA(10) = 'LAN'
+                  CMEGAN_NAME(11) = 'PFT1',
+                  CMEGAN_FILE(11) = 'pft1.asc',
+                  CMEGAN_FILETYPE(11) = 'ASCLLV',
+                  CMEGAN_AREA(11) = 'LAN'
+                  CMEGAN_NAME(12) = 'PFT4',
+                  CMEGAN_FILE(12) = 'pft4.asc',
+                  CMEGAN_FILETYPE(12) = 'ASCLLV',
+                  CMEGAN_AREA(12) = 'LAN'
+                  CMEGAN_NAME(13) = 'PFT9',
+                  CMEGAN_FILE(13) = 'pft9.asc',
+                  CMEGAN_FILETYPE(13) = 'ASCLLV',
+                  CMEGAN_AREA(13) = 'LAN'
+                  CMEGAN_NAME(14) = 'PFT13',
+                  CMEGAN_FILE(14) = 'pft13.asc',
+                  CMEGAN_FILETYPE(14) = 'ASCLLV',
+                  CMEGAN_AREA(14) = 'LAN'
+                  CMEGAN_NAME(15) = 'PFT14',
+                  CMEGAN_FILE(15) = 'pft14.asc',
+                  CMEGAN_FILETYPE(15) = 'ASCLLV',
+                  CMEGAN_AREA(15) = 'LAN'
+                  CMEGAN_NAME(9) = 'PFTru',
+                  CMEGAN_FILE(9) = 'pftru.asc',
+                  CMEGAN_FILETYPE(9) = 'ASCLLV',
+                  CMEGAN_AREA(9) = 'LAN' /
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/002_prep_pgd2/run_pgd.sh

+#!/bin/sh
+#SBATCH -J pgd_megan1
+#SBATCH -N 1            # nodes number (=NBP)
+#SBATCH -n 8            # CPUs number (on all nodes) (=NBP*TPN)
+#SBATCH -o run_megan.eo%j   #
+#SBATCH -e run_megan.eo%j   #
+#SBATCH -t 00:30:00    # time limit
+
+# Echo des commandes
+ulimit -c 0
+ulimit -s unlimited
+# Arrete du job des la premiere erreur
+set -e
+# Nom de la machine
+hostname
+
+. ~/DEV_57/MNH-PHYEX070-b95d84d7/conf/profile_mesonh-LXifort-R8I4-MNH-V5-6-2-ECRAD140-MPIAUTO-O2
+
+ln -sf ../001_prep_pgd1/BIOM* .
+ln -sf ~/SAVE/mesonh/PGD/* .
+ln -sf ~/SAVE/EMISSIONS_MEGAN/DATA/DATA_EMIS/* .
+ln -sf ~/SAVE/CHIMIE_FILES/EMISSIONS/* .
+ln -sf ~/SAVE/EMISSIONS_MEGAN/* .
+ln -sf ~/SAVE/EMISSIONS_DMS/* .
+
+export MPIRUN="Mpirun -np 8"
+
+set -x
+set -e
+
+
+time ${MPIRUN} PREP_PGD${XYZ}
+cd ../003_prep_nest
+sbatch run_prep_nest.sh

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/003_prep_nest/PRE_NEST_PGD1.nam

+&NAM_CONFIO LCDF4=.TRUE.,
+            LLFIOUT=.FALSE.,
+            LLFIREAD=.FALSE. /
+
+&NAM_CONF NHALO=0 /
+&NAM_PGD1 YPGD1 = 'BIOMAIDO_CH_8km' /
+&NAM_PGD2 YPGD2 = 'BIOMAIDO_CH_2km', IDAD = 1 /
+
+&NAM_NEST_PGD YNEST = 'ne' /
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/003_prep_nest/run_prep_nest.sh

+#!/bin/sh
+#SBATCH -J pgd_megan1
+#SBATCH -N 1            # nodes number (=NBP)
+#SBATCH -n 1            # CPUs number (on all nodes) (=NBP*TPN)
+#SBATCH -o run_megan.eo%j   #
+#SBATCH -e run_megan.eo%j   #
+#SBATCH -t 00:10:00    # time limit
+
+# Echo des commandes
+ulimit -c 0
+ulimit -s unlimited
+# Arrete du job des la premiere erreur
+set -e
+# Nom de la machine
+hostname
+
+ln -sf ../001_prep_pgd1/BIOM* .
+ln -sf ../002_prep_pgd2/BIOM* .
+. ~/DEV_57/MNH-PHYEX070-b95d84d7/conf/profile_mesonh-LXifort-R8I4-MNH-V5-6-2-ECRAD140-MPIAUTO-O2
+export MPIRUN="Mpirun -np 1"
+
+set -x
+set -e
+
+time ${MPIRUN} PREP_NEST_PGD${XYZ}
+cd ../004_prep_real_case_d1
+sbatch run_prep_real_case.sh

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/004_prep_real_case_d1/CAM1.nam

+
+CAM2MESONH
+transfer CAMS/ReLACS variables (default values) included aerosols
+37 # NUMBER OF OPTIONAL GRIB VARIABLES
+(A6,1X,I1,1X,F4.2,1X,A8,1X,F6.2,1X,F4.2,1X,A8,1X,F6.2,1X,F4.2,1X,A8,1X,F6.2,1X,F4.2,1X,A8,1X,F6.2)
+O3     1 1.00 go3       48.00                                                         
+CO     1 1.00 co        28.00
+H2O2   1 1.00 h2o2      34.00
+NO     1 1.00 no        30.00
+NO2    1 1.00 no2       46.00
+HNO3   1 1.00 hno3      63.00
+HNO4   1 1.00 ho2no2    79.00
+N2O5   1 1.00 n2o5     108.00
+NO3    1 1.00 no3       62.00
+HO2    1 1.00 ho2       33.00
+SO2    1 1.00 so2       64.10
+DMS    1.1.00 dms       62.10
+NH3    1 1.00 nh3       17.00
+MO2    1 1.00 ch3o2     47.00
+ETH    1 1.00 c2h6      30.02
+ALKA   4 0.39 c3h8      44.03 0.33 ch3oh     31.01 0.96 c2h5oh    46.02 1.03 par      12.00         
+ALKE   3 0.88 c2h4      28.00 1.19 c3h6      42.03 1.20 ole       24.00      
+BIO    2 1.00 c5h8      68.10 0.99 c10h16   136.00   
+KET    1 0.28 ch3coch3  58.00 
+CARBO  2 0.96 ch3cocho  72.10 1.07 ispd      70.00     
+PAN    1 1.00 pan      121.00        
+ONIT   1 1.00 onit      77.00
+HCHO   1 1.00 hcho      30.00
+ALD    1 1.00 ald2      24.00
+ORA1   1 1.00 hcooh     46.01
+OP1    1 1.00 ch3ooh    48.00
+OP2    1 1.00 rooh      47.00
+SO4I   1 0.20 aermr11    1.00
+SO4J   1 0.80 aermr11    1.00
+NH3I   1 0.20 nh4        1.00
+NH3J   1 0.80 nh4        1.00
+NO3I   1 0.20 no3_a      1.00
+NO3J   1 0.80 no3_a      1.00
+BCI    2 0.20 aermr10    1.00 0.20 aermr09    1.00
+OCI    2 0.20 aermr08    1.00 0.20 aermr07    1.00
+BCJ    2 0.80 aermr10    1.00 0.80 aermr09    1.00
+OCJ    2 0.80 aermr08    1.00 0.80 aermr07    1.00
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/004_prep_real_case_d1/CAM1_relacs.nam

+
+CAM2MESONH
+transfer CAMS/ReLACS variables (default values) included aerosols
+37 # NUMBER OF OPTIONAL GRIB VARIABLES
+(A6,1X,I1,1X,F4.2,1X,A8,1X,F6.2,1X,F4.2,1X,A8,1X,F6.2,1X,F4.2,1X,A8,1X,F6.2,1X,F4.2,1X,A8,1X,F6.2)
+O3     1 1.00 go3       48.00                                                         
+CO     1 1.00 co        28.00
+H2O2   1 1.00 h2o2      34.00
+NO     1 1.00 no        30.00
+NO2    1 1.00 no2       46.00
+HNO3   1 1.00 hno3      63.00
+HNO4   1 1.00 ho2no2    79.00
+N2O5   1 1.00 n2o5     108.00
+NO3    1 1.00 no3       62.00
+HO2    1 1.00 ho2       33.00
+SO2    1 1.00 so2       64.10
+DMS    1.1.00 dms       62.10
+NH3    1 1.00 nh3       17.00
+MO2    1 1.00 ch3o2     47.00
+ETH    1 1.00 c2h6      30.02
+ALKA   4 0.39 c3h8      44.03 0.33 ch3oh     31.01 0.96 c2h5oh    46.02 1.03 par      12.00         
+ALKE   3 0.88 c2h4      28.00 1.19 c3h6      42.03 1.20 ole       24.00      
+BIO    2 1.00 c5h8      68.10 0.99 c10h16   136.00   
+KET    1 0.28 ch3coch3  58.00 
+CARBO  2 0.96 ch3cocho  72.10 1.07 ispd      70.00     
+PAN    1 1.00 pan      121.00        
+ONIT   1 1.00 onit      77.00
+HCHO   1 1.00 hcho      30.00
+ALD    1 1.00 ald2      24.00
+ORA1   1 1.00 hcooh     46.01
+OP1    1 1.00 ch3ooh    48.00
+OP2    1 1.00 rooh      47.00
+SO4I   1 0.20 aermr11    1.00
+SO4J   1 0.80 aermr11    1.00
+NH3I   1 0.20 nh4        1.00
+NH3J   1 0.80 nh4        1.00
+NO3I   1 0.20 no3_a      1.00
+NO3J   1 0.80 no3_a      1.00
+BCI    2 0.20 aermr10    1.00 0.20 aermr09    1.00
+OCI    2 0.20 aermr08    1.00 0.20 aermr07    1.00
+BCJ    2 0.80 aermr10    1.00 0.80 aermr09    1.00
+OCJ    2 0.80 aermr08    1.00 0.80 aermr07    1.00
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/004_prep_real_case_d1/PRE_REAL1.nam

+
+&NAM_CONFIO     LCDF4=.TRUE., LLFIOUT=.FALSE., LLFIREAD=.FALSE.,
+                NIO_ABORT_LEVEL=0, NGEN_ABORT_LEVEL=0 /
+
+&NAM_REAL_CONF  NVERB=10, CEQNSYS='DUR', CPRESOPT='CRESI', LRES=.FALSE., XRES=1.E-07 /
+
+&NAM_FILE_NAMES HATMFILE='ecmwf.OD.20190328.06.00',
+                HATMFILETYPE='GRIBEX',
+                HPGDFILE='BIOMAIDO_CH_8km.nestne',
+                HCHEMFILE = 'CAMS_20190328_06.nc',
+                HCHEMFILETYPE='CAMSEU',
+                CINIFILE='ECMWF_D1_20190328_06'/
+
+&NAM_PREP_TEB  LTEB_CANOPY=T /
+
+&NAM_PREP_ISBA LISBA_CANOPY=T /
+
+&NAM_VER_GRID   NKMAX=45,
+                LTHINSHELL=.TRUE.,
+                YZGRID_TYPE='FUNCTN',
+                ZDZGRD=60.,
+                ZDZTOP=1000.,
+                ZZMAX_STRGRD=500.,
+                ZSTRGRD=7.,
+                ZSTRTOP=10. /
+
+&NAM_PREP_SURF_ATM  NHALO_PREP=0 /
+
+&NAM_CONF NHALO=0 /
+
+&NAM_CH_CONF LUSECHEM=T /
+
+&NAM_AERO_CONF LORILAM      = .TRUE.,
+               LSALT        = .TRUE.,
+               LDUST        = .TRUE.,
+               LINITPM      = .FALSE.,
+               CCLOUD = "LIMA",
+               NMOD_CCN  = 3,
+               NMOD_IFN  = 2,
+               LSLTCAMS = T,
+               LDSTCAMS = T,
+               XINIRADIUSI  = 0.015,
+               XINIRADIUSJ  = 0.055,
+               CRGUNIT      = "NUMB",
+               XINISIGI     = 1.4,
+               XINISIGJ     = 1.6,
+               XN0IMIN      = 1E2,
+               XN0JMIN      = 1E-2 /
+
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/004_prep_real_case_d1/PRE_REAL1.nam_06

+
+&NAM_CONFIO     LCDF4=.TRUE., LLFIOUT=.FALSE., LLFIREAD=.FALSE.,
+                NIO_ABORT_LEVEL=0, NGEN_ABORT_LEVEL=0 /
+
+&NAM_REAL_CONF  NVERB=10, CEQNSYS='DUR', CPRESOPT='CRESI', LRES=.FALSE., XRES=1.E-07 /
+
+&NAM_FILE_NAMES HATMFILE='ecmwf.OD.20190328.06.00',
+                HATMFILETYPE='GRIBEX',
+                HPGDFILE='BIOMAIDO_CH_8km.nestne',
+                HCHEMFILE = 'CAMS_20190328_06.nc',
+                HCHEMFILETYPE='CAMSEU',
+                CINIFILE='ECMWF_D1_20190328_06'/
+
+&NAM_PREP_TEB  LTEB_CANOPY=T /
+
+&NAM_PREP_ISBA LISBA_CANOPY=T /
+
+&NAM_VER_GRID   NKMAX=45,
+                LTHINSHELL=.TRUE.,
+                YZGRID_TYPE='FUNCTN',
+                ZDZGRD=60.,
+                ZDZTOP=1000.,
+                ZZMAX_STRGRD=500.,
+                ZSTRGRD=7.,
+                ZSTRTOP=10. /
+
+&NAM_PREP_SURF_ATM  NHALO_PREP=0 /
+
+&NAM_CONF NHALO=0 /
+
+&NAM_CH_CONF LUSECHEM=T /
+
+&NAM_AERO_CONF LORILAM      = .TRUE.,
+               LSALT        = .TRUE.,
+               LDUST        = .TRUE.,
+               LINITPM      = .FALSE.,
+               CCLOUD = "LIMA",
+               NMOD_CCN  = 3,
+               NMOD_IFN  = 2,
+               LSLTCAMS = T,
+               LDSTCAMS = T,
+               XINIRADIUSI  = 0.015,
+               XINIRADIUSJ  = 0.055,
+               CRGUNIT      = "NUMB",
+               XINISIGI     = 1.4,
+               XINISIGJ     = 1.6,
+               XN0IMIN      = 1E2,
+               XN0JMIN      = 1E-2 /
+
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/004_prep_real_case_d1/PRE_REAL1.nam_12

+
+&NAM_CONFIO     LCDF4=.TRUE., LLFIOUT=.FALSE., LLFIREAD=.FALSE.,
+                NIO_ABORT_LEVEL=0, NGEN_ABORT_LEVEL=0 /
+
+&NAM_REAL_CONF  NVERB=10, CEQNSYS='DUR', CPRESOPT='CRESI', LRES=.FALSE., XRES=1.E-07 /
+
+&NAM_FILE_NAMES HATMFILE='ecmwf.OD.20190328.12.00',
+                HATMFILETYPE='GRIBEX',
+                HPGDFILE='BIOMAIDO_CH_8km.nestne',
+                HCHEMFILE = 'CAMS_20190328_12.nc',
+                HCHEMFILETYPE='CAMSEU',
+                CINIFILE='ECMWF_D1_20190328_12'/
+
+&NAM_PREP_TEB  LTEB_CANOPY=T /
+
+&NAM_PREP_ISBA LISBA_CANOPY=T /
+
+&NAM_VER_GRID   NKMAX=45,
+                LTHINSHELL=.TRUE.,
+                YZGRID_TYPE='FUNCTN',
+                ZDZGRD=60.,
+                ZDZTOP=1000.,
+                ZZMAX_STRGRD=500.,
+                ZSTRGRD=7.,
+                ZSTRTOP=10. /
+
+&NAM_PREP_SURF_ATM  NHALO_PREP=0 /
+
+&NAM_CONF NHALO=0 /
+
+&NAM_CH_CONF LUSECHEM=T /
+
+&NAM_AERO_CONF LORILAM      = .TRUE.,
+               LSALT        = .TRUE.,
+               LDUST        = .TRUE.,
+               LINITPM      = .FALSE.,
+               CCLOUD = "LIMA",
+               NMOD_CCN  = 3,
+               NMOD_IFN  = 2,
+               LSLTCAMS = T,
+               LDSTCAMS = T,
+               XINIRADIUSI  = 0.015,
+               XINIRADIUSJ  = 0.055,
+               CRGUNIT      = "NUMB",
+               XINISIGI     = 1.4,
+               XINISIGJ     = 1.6,
+               XN0IMIN      = 1E2,
+               XN0JMIN      = 1E-2 /
+
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/004_prep_real_case_d1/run_prep_real_case.sh

+#!/bin/sh
+#SBATCH -J prep_megan
+#SBATCH -N 1            # nodes number (=NBP)
+#SBATCH -n 1            # CPUs number (on all nodes) (=NBP*TPN)
+#SBATCH -o run_megan.eo%j   #
+#SBATCH -e run_megan.eo%j   #
+#SBATCH -t 01:30:00    # time limit
+
+# Echo des commandes
+ulimit -c 0
+ulimit -s unlimited
+# Arrete du job des la premiere erreur
+set -e
+
+ln -sf ../003_prep_nest/BIOM* .
+ln -sf ~/SAVE/GRIB_KTEST/CAMS_20190328_* .
+ln -sf ~/SAVE/GRIB_KTEST/ecmwf.OD.20190328.* .
+. ~/DEV_57/MNH-PHYEX070-b95d84d7/conf/profile_mesonh-LXifort-R8I4-MNH-V5-6-2-ECRAD140-MPIAUTO-O2
+export MPIRUN="Mpirun -np 1"
+
+set -x
+set -e
+
+cp PRE_REAL1.nam_06 PRE_REAL1.nam
+time ${MPIRUN} PREP_REAL_CASE${XYZ}
+cp PRE_REAL1.nam_12 PRE_REAL1.nam
+time ${MPIRUN} PREP_REAL_CASE${XYZ}
+
+cd ../005_prep_real_case_d2
+sbatch run_prep_real_case.sh

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/005_prep_real_case_d2/PRE_REAL1.nam

+&NAM_CONFIO     LCDF4=.TRUE., LLFIOUT=.FALSE., LLFIREAD=.FALSE.,
+                NIO_ABORT_LEVEL=0, NGEN_ABORT_LEVEL=0 /
+
+&NAM_REAL_CONF  NVERB=10, CEQNSYS='DUR', CPRESOPT='CRESI', LRES=.FALSE., XRES=1.E-07 /
+
+&NAM_FILE_NAMES HATMFILE='ECMWF_D1_20190328_06.spa',
+                HATMFILETYPE='MESONH',
+                HPGDFILE='BIOMAIDO_CH_2km.nestne',
+                CINIFILE='ECMWF_D2_20190328_06'/
+
+&NAM_PREP_TEB  LTEB_CANOPY=T /
+
+&NAM_PREP_ISBA LISBA_CANOPY=T /
+
+&NAM_PREP_SURF_ATM  NHALO_PREP=0 /
+
+&NAM_CONF NHALO=0 /
+
+&NAM_CH_CONF LUSECHEM=T /
+
+&NAM_AERO_CONF LORILAM      = .TRUE.,
+               LSALT        = .TRUE.,
+               LDUST        = .TRUE.,
+               LINITPM      = .FALSE.,
+               CCLOUD = "LIMA",
+               NMOD_CCN  = 3,
+               NMOD_IFN  = 2,
+               LSLTCAMS = T,
+               LDSTCAMS = T,
+               XINIRADIUSI  = 0.015,
+               XINIRADIUSJ  = 0.055,
+               CRGUNIT      = "NUMB",
+               XINISIGI     = 1.4,
+               XINISIGJ     = 1.6,
+               XN0IMIN      = 1E2,
+               XN0JMIN      = 1E-2 /
+
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/005_prep_real_case_d2/SPAWN1.nam

+&NAM_LUNIT2_SPA  CINIFILE = "ECMWF_D1_20190328_06",
+                 CINIFILEPGD = "BIOMAIDO_CH_8km.nestne",
+                 YDOMAIN  = "BIOMAIDO_CH_2km.nestne",
+                 YSPANBR = '' /
+
+&NAM_CONFIO      LCDF4 = T, NIO_ABORT_LEVEL=1, NGEN_ABORT_LEVEL=1 /
+
+&NAM_PREP_SURF_ATM NHALO_PREP=0 /
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/005_prep_real_case_d2/run_prep_real_case.sh

+#!/bin/sh
+#SBATCH -J prep_d2_megan
+#SBATCH -N 1            # nodes number (=NBP)
+#SBATCH -n 1            # CPUs number (on all nodes) (=NBP*TPN)
+#SBATCH -o run_megan.eo%j   #
+#SBATCH -e run_megan.eo%j   #
+#SBATCH -t 00:30:00    # time limit
+
+# Echo des commandes
+ulimit -c 0
+ulimit -s unlimited
+# Arrete du job des la premiere erreur
+set -e
+
+ln -sf ../003_prep_nest/BIOM* .
+ln -sf ../004_prep_real_case_d1/ECMWF* .
+. ~/DEV_57/MNH-PHYEX070-b95d84d7/conf/profile_mesonh-LXifort-R8I4-MNH-V5-6-2-ECRAD140-MPIAUTO-O2
+
+export MPIRUN="Mpirun -np 1"
+
+set -x
+set -e
+
+time ${MPIRUN} SPAWNING${XYZ}
+time ${MPIRUN} PREP_REAL_CASE${XYZ}
+cd ../006_mesonh_283TO3003
+sbatch run_mesonh.sh

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/006_mesonh_283TO3003/DIAG1.nam

+&NAM_CONFIO LCDF4 = .TRUE.,
+            LLFIREAD = .FALSE.,
+            LLFIOUT = .FALSE. /
+
+&NAM_DIAG_FILE YINIFILE(1) = 'A2830.1.MEGA2.001',
+               YINIFILEPGD(1) = 'BIOMAIDO_CH_8km.nestne',
+               YSUFFIX = 'diag' /
+
+&NAM_DIAG LTPZH = .TRUE,
+          LMSLP = .TRUE.,
+          LTHW = .TRUE.,
+          CISO='PREVTK',
+          LCHEMDIAG = .TRUE. /
+
+&NAM_DIAG_SURFn N2M=2,
+                LSURF_BUDGET=.TRUE.,
+                LCOEF=.TRUE. /
+
+&NAM_DIAG_SURF_ATMn LFRAC=.TRUE.,
+                    LDIAG_GRID=.TRUE. /
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/006_mesonh_283TO3003/EXSEG1.nam

+&NAM_CONF  CCONF = "START", NVERB=1, NMODEL = 2,
+            CEXP = "A2830", CSEG = "MEGAD" , NHALO=3,
+            CSPLIT="BSPLITTING" /
+
+&NAM_CONFIO LCDF4 = .TRUE., LLFIOUT = .FALSE., NIO_ABORT_LEVEL=1, NGEN_ABORT_LEVEL=1 /
+
+&NAM_DYN XSEGLEN = 21600.,
+         LCORIO = T,
+         LNUMDIFU = F,
+         XALKTOP = 0.005,
+         XALZBOT = 15000. /
+
+&NAM_SERIESn NFREQSERIES = 30 /
+
+&NAM_LUNITn CINIFILE = "ECMWF_D1_20190328_06",
+            CINIFILEPGD="BIOMAIDO_CH_8km.nestne",
+            CCPLFILE(1) = "ECMWF_D1_20190328_12" /
+
+&NAM_NESTING NDAD(2) = 1, NDTRATIO(2) = 5, XWAY(2) = 2. /
+
+
+&NAM_DYNn  XTSTEP = 30.,
+           CPRESOPT = "ZRESI",
+           NITR = 12,
+           LHORELAX_UVWTH = F, LHORELAX_RV = F, LVE_RELAX = T,
+           NRIMX = 5, NRIMY = 5, XRIMKMAX = 0.01 /
+
+&NAM_ADVn  CUVW_ADV_SCHEME="WENO_K",NWENO_ORDER=5,CTEMP_SCHEME="RK53",
+           CMET_ADV_SCHEME = "PPM_01", CSV_ADV_SCHEME = "PPM_01" /
+
+&NAM_PARAMn  CCLOUD = "LIMA", CTURB = "TKEL", CRAD = "ECMW",
+             CDCONV = "NONE", CSCONV="EDKF" /
+
+&NAM_PARAM_RADn  XDTRAD = 600., XDTRAD_CLONLY = 600., NRAD_COLNBR = 400 /
+
+&NAM_PARAM_KAFRn XDTCONV = 360., NICE = 1, LCHTRANS = F,
+                 LREFRESH_ALL = T, LDOWN = T /
+
+&NAM_PARAM_MFSHALLn CMF_UPDRAFT = "EDKF", CMF_CLOUD = "DIRE" /
+
+&NAM_LBCn  CLBCX = 2*"OPEN", CLBCY = 2*"OPEN" /
+
+&NAM_TURBn   CTURBLEN = "BL89", CTURBDIM = "1DIM", LSIG_CONV = F, LTURB_FLX=F /
+
+
+&NAM_CH_MNHCn LUSECHEM = .TRUE.,
+              LCH_CONV_LINOX = .FALSE.,
+              LCH_INIT_FIELD = .FALSE.,
+              LCH_CONV_SCAV = .TRUE.,
+              CCHEM_INPUT_FILE  = "ReLACS_MACCity_aero.nam",
+              NCH_SUBSTEPS = 2,
+              LCH_TUV_ONLINE = .FALSE.,
+              CCH_TUV_LOOKUP = "PHOTO.TUV5",
+              CCH_TUV_CLOUDS = "CHAN",
+              XCH_TUV_TUPDATE = 300.,
+              XCH_TUV_DOBNEW = 250.,
+              CCH_VEC_METHOD = 'MAX'
+              NCH_VEC_LENGTH  = 50 /
+
+&NAM_CH_SOLVERn CSOLVER = "EXQSSA",
+                XSLOW    = 90.,
+                XFAST    = 0.1,
+                XDTMIN   = 0.1,
+                XDTMAX   = 45.,
+                XDTFIRST = 10. /
+
+&NAM_BACKUP XBAK_TIME(1,1)=120. ,
+            XBAK_TIME(1,2)=7200. ,
+            XBAK_TIME(1,3)=10800. ,
+            XBAK_TIME(1,4)=14400. ,
+            XBAK_TIME(1,5)=18000. ,
+            XBAK_TIME(1,6)=21600. ,
+            XBAK_TIME(1,7)=25200. ,
+            XBAK_TIME(1,8)=28800. ,
+            XBAK_TIME(1,9)=32400. ,
+            XBAK_TIME(1,10)=36000. ,
+            XBAK_TIME(1,11)=39600. ,
+            XBAK_TIME(1,12)=43200.  /
+
+&NAM_PARAM_LIMA LACTI = T,
+                HINI_CCN='AER',
+                HTYPE_CCN(1) = 'C',
+                HTYPE_CCN(2) = 'C',
+                HTYPE_CCN(3) = 'C',
+                NMOD_CCN = 3,      ! Nombre de modes de CCN
+                LACTIT=T,
+                LSEDC=T,
+                LSCAV=T,           ! Scavenging
+                LAERO_MASS=F,
+                LCCN_HOM=F,         ! Concentration en CCN homogène selon z
+                CCCN_MODES='CAMS_JPP',  ! Choix des modes de CCN
+                XCCN_CONC(1) = 300.,          ! Concentration du mode 1 de CCN (/cm3)
+                XCCN_CONC(2) = 140.,          ! Concentration du mode 2 de CCN (/cm3)
+                XCCN_CONC(3) = 50.,           ! Concentration du mode 3 de CCN (/cm3)
+                XCCN_CONC(4) = 0.01,          ! Concentration du mode 4 de CCN (/cm3)
+                LNUCL = T,
+                LSEDI = T,
+                LHHONI = F,
+                NMOD_IFN = 2,          ! Nombre de modes d'IFN
+                CPRISTINE_ICE_LIMA = 'PLAT',
+                CHEVRIMED_ICE_LIMA = 'GRAU',
+                NIND_SPECIE = 1,
+                LMEYERS = F,
+                NMOD_IMM = 1,          ! Nombre de modes de CCN agissant par IMM
+                LIFN_HOM = T,           ! Concentration en IFN homogène selon z
+                CIFN_SPECIES = '',    !
+                CINT_MIXING = 'MACC_JPP',      ! DM1, DM2, BC, O, MACC, default (Phillips 2008)
+                XIFN_CONC(1) = 10.,                ! Concentration du mode 1 d'IFN (/L)
+                XIFN_CONC(2) = 10. /               ! Concentration du mode 2 d'IFN (/L)
+
+&NAM_CH_ORILAM  LORILAM    = .TRUE.,
+                LVARSIGI   = .FALSE.,
+                LVARSIGJ   = .FALSE.,
+                LRGFIX     = .FALSE.,
+                LSEDIMAERO = .TRUE.,
+                LDEPOS_AER(1) = .TRUE.,
+                LDEPOS_AER(2) = .TRUE.,
+                XN0IMIN    = 5.,
+                XN0JMIN    = 0.001,
+                XINIRADIUSI= 0.015,
+                XINIRADIUSJ= 0.055,
+                XINISIGI   = 1.400,
+                XINISIGJ   = 1.600,
+                CNUCLEATION = "MAATTANEN_NEUTRAL",
+                LCONDENSATION = .TRUE.,
+                LCOAGULATION  = .TRUE.,
+                LMODE_MERGING = .TRUE.,
+                XRADIUS_NUCL  = 15E-3,
+                XSIGMA_NUCL   = 1.2 /
+
+&NAM_DIAG_SURFn N2M = 0, LSURF_BUDGET = F /
+
+&NAM_ISBAn CSCOND="NP89", CC1DRY="DEF",
+           CSOILFRZ="DEF", CDIFSFCOND="DEF",
+           CSNOWRES="DEF" /
+
+&NAM_SSOn CROUGH="Z01D" /
+
+&NAM_DIAG_ISBAn /
+
+&NAM_DUST LDUST = .FALSE.,
+          LRGFIX_DST = .FALSE.,
+          LVARSIG = .FALSE.,
+          LSEDIMDUST = .TRUE.,
+          LDEPOS_DST(1) = .TRUE.,
+          LDEPOS_DST(2) = .TRUE.,
+          LDEPOS_DST(3) = .TRUE.,
+          NMODE_DST = 3 /
+
+&NAM_SALT LSALT = .TRUE.,
+          LRGFIX_SLT = .FALSE.,
+          LVARSIG_SLT = .FALSE.,
+          LSEDIMSALT = .TRUE.,
+          LDEPOS_SLT(1) = .TRUE.,
+          LDEPOS_SLT(2) = .TRUE.,
+          CRGUNITS   = 'NUMB',
+          NMODE_SLT = 8 /
+
+&NAM_SURF_SLT CEMISPARAM_SLT='OvB21b' /
+
+&NAM_SURF_DST CEMISPARAM_DST='AMMA', CVERMOD='CMDVER' /
+
+&NAM_SEAFLUXn CSEA_ALB="TA96", LPRECIP = T /
+
+&NAM_CH_SURFn    LCH_SURF_EMIS=T, LCH_DMSEMIS=T /
+
+&NAM_CH_CONTROLn CCHEM_SURF_FILE= "ReLACS_MACCity_aero.nam" /
+
+&NAM_CH_ISBAn    LCH_BIO_FLUX=T, CCH_DRY_DEP="WES89", CPARAMBVOC="MEGAN",
+                 XDAILYPAR=300., XDAILYTEMP=290. /
+
+&NAM_CH_SEAFLUXn CCH_DRY_DEP="WES89" /
+
+&NAM_CH_WATFLUXn CCH_DRY_DEP="WES89" /
+
+&NAM_CH_TEBn     CCH_DRY_DEP="WES89" /
+
+&NAM_CHS_ORILAM     LCH_AERO_FLUX = .TRUE.,
+                    LCO2PM=.FALSE.,
+                    XEMISRADIUSI  = 0.015,
+                    XEMISRADIUSJ  = 0.055,
+                    XEMISSIGI     = 1.40,
+                    XEMISSIGJ     = 1.60,
+                    CRGUNIT = "NUMB" /
+
+
+&NAM_BLANK /
+
+&NAM_NEBn LSIGMAS=T, LSUBG_COND=F  /
+&NAM_PARAM_ICEn CSUBG_AUCV_RC='NONE'/

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/006_mesonh_283TO3003/EXSEG2.nam

+&NAM_LUNITn CINIFILE = "ECMWF_D2_20190328_06",
+            CINIFILEPGD="BIOMAIDO_CH_2km.nestne" /
+
+&NAM_DYNn  CPRESOPT = "ZRESI", 
+           NITR = 12,
+           LVE_RELAX = T,
+           NRIMX = 5, NRIMY = 5, XRIMKMAX = 0.0083,LHORELAX_RH=F /
+
+&NAM_ADVn  CUVW_ADV_SCHEME="WENO_K",NWENO_ORDER=5,CTEMP_SCHEME="RK53",
+           CMET_ADV_SCHEME = "PPM_01", CSV_ADV_SCHEME = "PPM_01" /
+
+&NAM_PARAMn  CCLOUD = "LIMA", CTURB = "TKEL", CRAD = "ECMW",
+             CDCONV = "NONE", CSCONV= "EDKF" /
+
+&NAM_PARAM_MFSHALLn CMF_UPDRAFT='EDKF',CMF_CLOUD='DIRE', LMIXUV=T /
+
+&NAM_PARAM_RADn  XDTRAD = 600., XDTRAD_CLONLY = 600., NRAD_COLNBR = 400 /
+
+&NAM_LBCn  CLBCX = 2*"OPEN", CLBCY = 2*"OPEN" /
+
+&NAM_TURBn CTURBLEN = "BL89", CTURBDIM = "1DIM", LTURB_FLX=F /
+
+&NAM_CH_MNHCn LUSECHEM = .TRUE.,
+              LCH_CONV_LINOX = .FALSE.,
+              LCH_INIT_FIELD = .FALSE.,
+              LCH_CONV_SCAV = .TRUE.,
+              CCHEM_INPUT_FILE  = "ReLACS_MACCity_aero.nam",
+              NCH_SUBSTEPS = 2,
+              LCH_TUV_ONLINE = .FALSE.,
+              CCH_TUV_LOOKUP = "PHOTO.TUV5",
+              CCH_TUV_CLOUDS = "CHAN",
+              XCH_TUV_TUPDATE = 300.,
+              XCH_TUV_DOBNEW = 250.,
+              CCH_VEC_METHOD = 'MAX'
+              NCH_VEC_LENGTH  = 50 /
+
+&NAM_CH_SOLVERn CSOLVER = "EXQSSA",
+                XSLOW    = 90.,
+                XFAST    = 0.1,
+                XDTMIN   = 0.1,
+                XDTMAX   = 45.,
+                XDTFIRST = 10. /
+
+&NAM_DIAG_SURFn N2M = 0, LSURF_BUDGET = F /
+
+&NAM_ISBAn CSCOND="NP89", 
+       CC1DRY="DEF", CSOILFRZ="DEF", CDIFSFCOND="DEF", CSNOWRES="DEF" /
+
+&NAM_SSOn CROUGH="Z01D" /
+
+&NAM_DIAG_ISBAn /
+
+&NAM_SEAFLUXn CSEA_ALB="TA96", LPRECIP = T /
+
+&NAM_CH_SURFn    LCH_SURF_EMIS=T /
+
+&NAM_CH_CONTROLn CCHEM_SURF_FILE= "ReLACS_MACCity_aero.nam" /
+
+&NAM_CH_ISBAn    LCH_BIO_FLUX=T, CCH_DRY_DEP="WES89", CPARAMBVOC="MEGAN",
+                 XDAILYPAR=150., XDAILYTEMP=290. /
+
+&NAM_CH_SEAFLUXn CCH_DRY_DEP="WES89" /
+
+&NAM_CH_WATFLUXn CCH_DRY_DEP="WES89" /
+
+&NAM_CH_TEBn     CCH_DRY_DEP="WES89" /
+
+&NAM_NEBn LSIGMAS=T , LSUBG_COND = F  /
+&NAM_PARAM_ICEn CSUBG_AUCV_RC='NONE'/
\ No newline at end of file

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/006_mesonh_283TO3003/ReLACS_MACCity_aero.nam

+===================================================================
+*** the following section will be read by ch_field_valuen.f90 ***
+===================================================================
+
+FORMPROF
+PROFILES      LEVELS
+12              9
+(F7.1,12F7.4)
+    0.0  0.000  0.660  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  
+  500.0  0.000  0.660  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000
+ 1000.0  0.000  0.770  0.400  0.660  0.160  1.000  1.000  1.000  0.500  0.200  1.000  1.000
+ 1500.0  0.000  0.880  0.020  0.330  0.016  1.000  1.000  1.000  0.200  0.200  1.000  1.000
+ 3000.0  0.000  0.660  0.010  0.130  0.003  0.500  1.000  1.000  0.100  0.002  1.000  1.000
+ 4500.0  0.000  0.770  0.003  0.130  0.003  0.500  1.000  1.000  0.050  0.000  1.000  0.010
+ 6000.0  0.000  1.000  0.003  0.130  0.003  1.000  1.000  0.500  0.050  0.000  1.000  0.010
+10000.0  0.000  1.000  0.003  0.000  0.003  1.000  1.000  1.000  0.050  0.000  1.000  0.010
+30000.0  1.000  1.000  0.003  0.000  0.003  1.000  1.000  1.000  0.050  0.000  1.000  0.010
+
+===================================================================
+*** the following section will be read by ch_field_valuen.f90 ***
+===================================================================
+
+NORMINIT
+!!PUT YOUR OWN VALUES HERE!! initial values (units are par per part = MIX)
+MIX
+3
+(1X,a12,1X,E25.8)
+'SO2         '           1.00000000E-12
+'NO          '           1.00000000E-12
+
+===================================================================
+*** the following section will be read by ch_field_valuen.f90 ***
+===================================================================
+
+PROFASSO
+norm-profiles to be associated
+2
+(1X,A12,1X,I3)
+'SO2         '  2
+'NO          '  7
+
+=====================================================================
+*** the following section will be read by ch_init_dep_isban.F90 ***
+=====================================================================
+
+SURF_RES
+surface resistances (s/m), refer to Seinfeld and Pandis, 1998, p. 975, Tab.19.2
+ 7
+(1X,A12,1X,E24.8)
+'RCSNOWO3    '          0.99990000E+04
+'RCSNOWSO2   '          0.99990000E+04
+'RCCLAYO3    '          0.99990000E+04
+'RCCLAYSO2   '          0.99990000E+04
+'RCSANDO3    '          0.99990000E+04
+'RCSANDSO2   '          0.99990000E+04
+'LANDREXT    '          0.99990000E+04
+
+=====================================================================
+*** the following section will be read by ch_init_depconst.F90 ***
+=====================================================================
+
+MASS_MOL
+molecular mass (in g/mol) for molecular diffusion
+ 41
+(A32,2E15.5)
+O3                                  0.48000E+02
+H2O2                                0.34000E+02
+NO                                  0.30000E+02
+NO2                                 0.46000E+02
+NO3                                 0.62000E+02
+N2O5                                0.10800E+03
+HONO                                0.47000E+02
+HNO3                                0.63000E+02
+HNO4                                0.79000E+02
+NH3                                 0.17000E+02
+SO2                                 0.64000E+02
+SULF                                0.98000E+02
+CO                                  0.28000E+02
+OH                                  0.17000E+02
+HO2                                 0.33000E+02
+CH4                                 0.16000E+02
+ETH                                 0.30000E+02
+ALKA                                0.50861E+02
+ALKE                                0.29160E+02
+BIO                                 0.10200E+03
+ARO                                 0.10100E+03
+HCHO                                0.30000E+02
+ALD                                 0.44000E+02
+KET                                 0.72000E+02
+CARBO                               0.66900E+02
+ONIT                                0.11900E+03
+PAN                                 0.12100E+03
+OP1                                 0.48000E+02
+OP2                                 0.63100E+02
+ORA1                                0.46000E+02
+ORA2                                0.60000E+02
+MO2                                 0.47000E+02
+ALKAP                               0.81380E+02
+ALKEP                               0.83611E+02
+BIOP                                0.11700E+03
+PHO                                 0.10700E+03
+ADD                                 0.11680E+03
+AROP                                0.14867E+03
+CARBOP                              0.85434E+02
+OLN                                 0.13600E+03
+XO2                                 0.10000E+03
+
+=====================================================================
+*** the following section will be read by ch_init_depconst.F90 ***
+=====================================================================
+
+REA_FACT
+reactivity factor with biology, Seinfeld and Pandis, 1998, p. 975, Tab. 19.3
+41
+(A32,2E15.5)
+O3                                  0.10000E+01
+H2O2                                0.10000E+01
+NO                                  0.00000E+00
+NO2                                 0.10000E+00
+NO3                                 0.10000E+00
+N2O5                                0.10000E+00
+HONO                                0.10000E+00
+HNO3                                0.00000E+00
+HNO4                                0.00000E+00
+NH3                                 0.00000E+00
+SO2                                 0.00000E+00
+SULF                                0.00000E+00
+CO                                  0.00000E+00
+OH                                  0.00000E+00
+HO2                                 0.00000E+00
+CH4                                 0.00000E+00
+ETH                                 0.00000E+00
+ALKA                                0.00000E+00
+ALKE                                0.00000E+00
+BIO                                 0.00000E+00
+ARO                                 0.00000E+00
+HCHO                                0.00000E+00
+ALD                                 0.00000E+00
+KET                                 0.00000E+00
+CARBO                               0.00000E+00
+ONIT                                0.00000E+00
+PAN                                 0.10000E+00
+OP1                                 0.30000E+00
+OP2                                 0.10000E+00
+ORA1                                0.00000E+00
+ORA2                                0.00000E+00
+MO2                                 0.00000E+00
+ALKAP                               0.00000E+00
+ALKEP                               0.00000E+00
+BIOP                                0.00000E+00
+PHO                                 0.00000E+00
+ADD                                 0.00000E+00
+AROP                                0.00000E+00
+CARBOP                              0.00000E+00
+OLN                                 0.00000E+00
+XO2                                 0.00000E+00
+ 
+=====================================================================
+*** the following section will be read by ch_init_depconst.F90 ***
+=====================================================================
+
+HENRY_SP
+Effective Henrys law factor / exponent, See Leriche et al.2013
+  35
+(A32,2E15.5)                            
+O3                                  1.03000E-02   -0.28300E+04
+H2O2                                8.44000E+04   -0.76000E+04
+NO                                  1.92000E-03   -0.17900E+04
+NO2                                 1.20000E-02   -0.25160E+04
+NO3                                 3.80000E-02   -0.87070E+04
+N2O5                                2.10000E+00   -0.34000E+04
+HONO                                8.38000E+04   -0.31200E+04
+HNO3                                1.46000E+13   -0.10500E+05
+HNO4                                4.78000E+04   -0.69000E+04
+NH3                                 3.24000E+03    0.19000E+03
+SO2                                 5.59000E+04   -0.48950E+04
+SULF                                6.64000E+14   -0.87000E+04
+CO                                  9.81000E-04   -0.17200E+04
+OH                                  3.90000E+01   -0.00000E+00
+HO2                                 3.49000E+04   -0.00000E+00
+CH4                                 1.41000E-03   -0.20400E+04
+ETH                                 1.88000E-03   -0.28750E+05
+ALKA                                0.15000E-02   -0.32750E+04
+ALKE                                0.59600E-02   -0.21700E+04
+BIO                                 0.38500E-01   -0.00000E+00
+ARO                                 0.18000E+00   -0.41000E+04
+HCHO                                3.23000E+03   -0.71960E+04
+ALD                                 0.12900E+02   -0.58900E+04
+KET                                 0.27800E+02   -0.55300E+04
+CARBO                               0.36000E+06   -0.75450E+04
+ONIT                                0.10000E+02   -0.59100E+04
+PAN                                 0.28000E+01   -0.57300E+04
+OP1                                 0.30000E+01   -0.52800E+04
+OP2                                 0.33600E+01   -0.59950E+04
+ORA1                                5.07000E+06   -0.59500E+04
+ORA2                                2.66000E+05   -0.62000E+04
+MO2                                 0.24500E+01   -0.23200E+04
+ALKAP                               0.26600E+03   -0.60000E+04
+ALKEP                               0.83000E+03   -0.60000E+04
+BIOP                                0.23110E+04   -0.60000E+04
+
+================================================================
+*** the following section will be read by build_emisstabn.F90 ***
+*** <called by ch_init_emissionn.F90>  ***
+*** CON: flux is given in molecules/cm2/s ***
+================================================================
+
+EMISUNIT
+Emission
+CON
+
+================================================================
+*** the following section will be read by build_pronoslistn.F90 ***
+*** <called by ch_init_emissionn.F90>  ***
+* Format: Nom espece pronostic Meso-NH - Facteur Aggregation - NOM ESPECE EMISE 
+* expl: NO (espece Meso-NH)  0.70 (facteur aggregation) NOXAN (espece emise PGD)  
+================================================================
+
+AGREGATION
+EMISSIONS MACC-CITY - schema ReLACS
+NO   0.70 NOXAN  
+NO2  0.30 NOXAN 
+SO2  1.00 SO2AN
+NH3  1.00 NH3AN
+CO   1.00 COAN 
+ETH  1.00 C2H6AN 
+ALKA 0.39 C3H8AN 1.25 BALKAN  0.33 MTOLAN  1.29 BOLAN
+ALKE 0.90 C2H4AN  1.18 C3H6AN  1.20 BENEAN 
+ARO  1.00 AROAN 
+HCHO 1.00 CH2OAN
+ALD  1.00 BALDAN
+KET  0.36 ACETAN 2.35 BONEAN
+BCJ  1.0 BCAN    1.0 BCANSEA
+OCJ  1.0 OCAN    1.0 OCANSEA
+END_AGREGATION
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/006_mesonh_283TO3003/ReLACS_MACCity_gas.nam

+===================================================================
+*** the following section will be read by ch_field_valuen.f90 ***
+===================================================================
+
+FORMPROF
+PROFILES      LEVELS
+12              9
+(F7.1,12F7.4)
+    0.0  0.000  0.660  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  
+  500.0  0.000  0.660  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000  1.000
+ 1000.0  0.000  0.770  0.400  0.660  0.160  1.000  1.000  1.000  0.500  0.200  1.000  1.000
+ 1500.0  0.000  0.880  0.020  0.330  0.016  1.000  1.000  1.000  0.200  0.200  1.000  1.000
+ 3000.0  0.000  0.660  0.010  0.130  0.003  0.500  1.000  1.000  0.100  0.002  1.000  1.000
+ 4500.0  0.000  0.770  0.003  0.130  0.003  0.500  1.000  1.000  0.050  0.000  1.000  0.010
+ 6000.0  0.000  1.000  0.003  0.130  0.003  1.000  1.000  0.500  0.050  0.000  1.000  0.010
+10000.0  0.000  1.000  0.003  0.000  0.003  1.000  1.000  1.000  0.050  0.000  1.000  0.010
+30000.0  1.000  1.000  0.003  0.000  0.003  1.000  1.000  1.000  0.050  0.000  1.000  0.010
+
+===================================================================
+*** the following section will be read by ch_field_valuen.f90 ***
+===================================================================
+
+NORMINIT
+!!PUT YOUR OWN VALUES HERE!! initial values (units are par per part = MIX)
+MIX
+3
+(1X,a12,1X,E25.8)
+'SO2         '           1.00000000E-12
+'NO          '           1.00000000E-12
+
+===================================================================
+*** the following section will be read by ch_field_valuen.f90 ***
+===================================================================
+
+PROFASSO
+norm-profiles to be associated
+2
+(1X,A12,1X,I3)
+'SO2         '  2
+'NO          '  7
+
+=====================================================================
+*** the following section will be read by ch_init_dep_isban.F90 ***
+=====================================================================
+
+SURF_RES
+surface resistances (s/m), refer to Seinfeld and Pandis, 1998, p. 975, Tab.19.2
+ 7
+(1X,A12,1X,E24.8)
+'RCSNOWO3    '          0.99990000E+04
+'RCSNOWSO2   '          0.99990000E+04
+'RCCLAYO3    '          0.99990000E+04
+'RCCLAYSO2   '          0.99990000E+04
+'RCSANDO3    '          0.99990000E+04
+'RCSANDSO2   '          0.99990000E+04
+'LANDREXT    '          0.99990000E+04
+
+=====================================================================
+*** the following section will be read by ch_init_depconst.F90 ***
+=====================================================================
+
+MASS_MOL
+molecular mass (in g/mol) for molecular diffusion
+ 41
+(A32,2E15.5)
+O3                                  0.48000E+02
+H2O2                                0.34000E+02
+NO                                  0.30000E+02
+NO2                                 0.46000E+02
+NO3                                 0.62000E+02
+N2O5                                0.10800E+03
+HONO                                0.47000E+02
+HNO3                                0.63000E+02
+HNO4                                0.79000E+02
+NH3                                 0.17000E+02
+SO2                                 0.64000E+02
+SULF                                0.98000E+02
+CO                                  0.28000E+02
+OH                                  0.17000E+02
+HO2                                 0.33000E+02
+CH4                                 0.16000E+02
+ETH                                 0.30000E+02
+ALKA                                0.50861E+02
+ALKE                                0.29160E+02
+BIO                                 0.10200E+03
+ARO                                 0.10100E+03
+HCHO                                0.30000E+02
+ALD                                 0.44000E+02
+KET                                 0.72000E+02
+CARBO                               0.66900E+02
+ONIT                                0.11900E+03
+PAN                                 0.12100E+03
+OP1                                 0.48000E+02
+OP2                                 0.63100E+02
+ORA1                                0.46000E+02
+ORA2                                0.60000E+02
+MO2                                 0.47000E+02
+ALKAP                               0.81380E+02
+ALKEP                               0.83611E+02
+BIOP                                0.11700E+03
+PHO                                 0.10700E+03
+ADD                                 0.11680E+03
+AROP                                0.14867E+03
+CARBOP                              0.85434E+02
+OLN                                 0.13600E+03
+XO2                                 0.10000E+03
+
+=====================================================================
+*** the following section will be read by ch_init_depconst.F90 ***
+=====================================================================
+
+REA_FACT
+reactivity factor with biology, Seinfeld and Pandis, 1998, p. 975, Tab. 19.3
+41
+(A32,2E15.5)
+O3                                  0.10000E+01
+H2O2                                0.10000E+01
+NO                                  0.00000E+00
+NO2                                 0.10000E+00
+NO3                                 0.10000E+00
+N2O5                                0.10000E+00
+HONO                                0.10000E+00
+HNO3                                0.00000E+00
+HNO4                                0.00000E+00
+NH3                                 0.00000E+00
+SO2                                 0.00000E+00
+SULF                                0.00000E+00
+CO                                  0.00000E+00
+OH                                  0.00000E+00
+HO2                                 0.00000E+00
+CH4                                 0.00000E+00
+ETH                                 0.00000E+00
+ALKA                                0.00000E+00
+ALKE                                0.00000E+00
+BIO                                 0.00000E+00
+ARO                                 0.00000E+00
+HCHO                                0.00000E+00
+ALD                                 0.00000E+00
+KET                                 0.00000E+00
+CARBO                               0.00000E+00
+ONIT                                0.00000E+00
+PAN                                 0.10000E+00
+OP1                                 0.30000E+00
+OP2                                 0.10000E+00
+ORA1                                0.00000E+00
+ORA2                                0.00000E+00
+MO2                                 0.00000E+00
+ALKAP                               0.00000E+00
+ALKEP                               0.00000E+00
+BIOP                                0.00000E+00
+PHO                                 0.00000E+00
+ADD                                 0.00000E+00
+AROP                                0.00000E+00
+CARBOP                              0.00000E+00
+OLN                                 0.00000E+00
+XO2                                 0.00000E+00
+ 
+=====================================================================
+*** the following section will be read by ch_init_depconst.F90 ***
+=====================================================================
+
+HENRY_SP
+Effective Henrys law factor / exponent, See Leriche et al.2013
+  35
+(A32,2E15.5)                            
+O3                                  1.03000E-02   -0.28300E+04
+H2O2                                8.44000E+04   -0.76000E+04
+NO                                  1.92000E-03   -0.17900E+04
+NO2                                 1.20000E-02   -0.25160E+04
+NO3                                 3.80000E-02   -0.87070E+04
+N2O5                                2.10000E+00   -0.34000E+04
+HONO                                8.38000E+04   -0.31200E+04
+HNO3                                1.46000E+13   -0.10500E+05
+HNO4                                4.78000E+04   -0.69000E+04
+NH3                                 3.24000E+03    0.19000E+03
+SO2                                 5.59000E+04   -0.48950E+04
+SULF                                6.64000E+14   -0.87000E+04
+CO                                  9.81000E-04   -0.17200E+04
+OH                                  3.90000E+01   -0.00000E+00
+HO2                                 3.49000E+04   -0.00000E+00
+CH4                                 1.41000E-03   -0.20400E+04
+ETH                                 1.88000E-03   -0.28750E+05
+ALKA                                0.15000E-02   -0.32750E+04
+ALKE                                0.59600E-02   -0.21700E+04
+BIO                                 0.38500E-01   -0.00000E+00
+ARO                                 0.18000E+00   -0.41000E+04
+HCHO                                3.23000E+03   -0.71960E+04
+ALD                                 0.12900E+02   -0.58900E+04
+KET                                 0.27800E+02   -0.55300E+04
+CARBO                               0.36000E+06   -0.75450E+04
+ONIT                                0.10000E+02   -0.59100E+04
+PAN                                 0.28000E+01   -0.57300E+04
+OP1                                 0.30000E+01   -0.52800E+04
+OP2                                 0.33600E+01   -0.59950E+04
+ORA1                                5.07000E+06   -0.59500E+04
+ORA2                                2.66000E+05   -0.62000E+04
+MO2                                 0.24500E+01   -0.23200E+04
+ALKAP                               0.26600E+03   -0.60000E+04
+ALKEP                               0.83000E+03   -0.60000E+04
+BIOP                                0.23110E+04   -0.60000E+04
+
+================================================================
+*** the following section will be read by build_emisstabn.F90 ***
+*** <called by ch_init_emissionn.F90>  ***
+*** CON: flux is given in molecules/cm2/s ***
+================================================================
+
+EMISUNIT
+Emission
+CON
+
+================================================================
+*** the following section will be read by build_pronoslistn.F90 ***
+*** <called by ch_init_emissionn.F90>  ***
+* Format: Nom espece pronostic Meso-NH - Facteur Aggregation - NOM ESPECE EMISE 
+* expl: NO (espece Meso-NH)  0.70 (facteur aggregation) NOXAN (espece emise PGD)  
+================================================================
+
+AGREGATION
+EMISSIONS MACC-CITY - schema ReLACS
+NO   0.70 NOXAN  
+NO2  0.30 NOXAN 
+SO2  1.00 SO2AN
+NH3  1.00 NH3AN
+CO   1.00 COAN 
+ETH  1.00 C2H6AN 
+ALKA 0.39 C3H8AN 1.25 BALKAN  0.33 MTOLAN  1.29 BOLAN
+ALKE 0.90 C2H4AN  1.18 C3H6AN  1.20 BENEAN 
+ARO  1.00 AROAN 
+HCHO 1.00 CH2OAN
+ALD  1.00 BALDAN
+KET  0.36 ACETAN 2.35 BONEAN
+END_AGREGATION
+

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/006_mesonh_283TO3003/run_mesonh.sh

+#!/bin/sh
+#SBATCH -J run_biomaido
+#SBATCH -N 1            # nodes number (=NBP)
+#SBATCH -n 64           # CPUs number (on all nodes) (=NBP*TPN)
+#SBATCH -o run_megan.eo%j   #
+#SBATCH -e run_megan.eo%j   #
+#SBATCH -t 04:30:00    # time limit
+
+# Echo des commandes
+ulimit -c 0
+ulimit -s unlimited
+# Arrete du job des la premiere erreur
+set -e
+
+. ~/DEV_57/MNH-PHYEX070-b95d84d7/conf/profile_mesonh-LXifort-R8I4-MNH-V5-6-2-ECRAD140-MPIAUTO-O2
+
+ln -sf ../003_prep_nest/BIOM* .
+ln -sf ../004_prep_real_case_d1/ECMWF* .
+ln -sf ../005_prep_real_case_d2/ECMWF_D2_20190328_06* .
+export MPIRUN="Mpirun -np 64"
+
+set -x
+set -e
+
+ln -sf ~rodierq/SAVE/GRIB_KTEST/CHARMEX/CHIMIE_FILES/tuv531/DATA* .
+
+time ${MPIRUN} MESONH${XYZ}

MY_RUN/INTEGRATION_CASES/HPC/BIOMAIDO_DMS/PYTHON/plot_BIOMAIDO.py

+#!/usr/bin/env python3
+"""
+@author: Quentin Rodier
+Creation : 07/01/2021
+
+Last modifications
+"""
+import matplotlib as mpl
+mpl.use('Agg')
+import cartopy.crs as ccrs
+try:
+	import MNHPy
+	from MNHPy.read_MNHfile import read_netcdf
+	from MNHPy.Panel_Plot import PanelPlot
+except:
+	from read_MNHfile import read_netcdf
+	from Panel_Plot import PanelPlot
+import os
+
+Lpath=["../006_mesonh_283TO3003/"]
+LnameFiles=['A2830.1.MEGAD.006.nc']
+
+variables=['CO','O3','NO2','NO','BIOP','HCHO','BIO','latitude','longitude',
+           'ETH', 'CARBO','PHO','SO2','SULF','DMS','CH4','XO2','PAN',
+           'DEAERM31C','DEAERM32C','DEAERM31R','DEAERM32R',
+           'SLTM01','SLTM02','SLTM03','SLTM04','SLTM05','SLTM06','SLTM07','SLTM08']
+Dvar_input = {'f1': variables}
+
+#  Read the variables in the files
+Dvar = {}
+Dvar = read_netcdf(LnameFiles, Dvar_input, path=Lpath, removeHALO=True, get_data_only=True)
+
+os.system('rm -f tempgraph*')
+
+f=Dvar['f1']
+nb_subplot=4
+
+lon = [Dvar['f1']['longitude']]*nb_subplot
+lat = [Dvar['f1']['latitude']]*nb_subplot
+Lxlab = ['longitude']*nb_subplot
+Lylab = ['latitude']*nb_subplot
+Lprojection = [ccrs.PlateCarree()]*nb_subplot
+Llvl = [0]*nb_subplot
+
+################################################################
+#########          PANEL 1
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['BIOP'],f['BIO'],f['CO'],f['HCHO']]
+Ltitle = ['BIOP','BIO','CO','HCHO']
+Lminval=[0,      0,    30,    0.001 ]
+Lmaxval=[15.0,  1000, 110,    1  ]
+Lstep=[0.25,      20,   2,    0.04 ]
+Lstepticks=[1,   100,  10,   0.1 ]
+Lfacconv=[1E12,1E12,1E9,1E9    ]
+Lcbarlabel = ['ppt','ppt','ppb','ppb']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20], 
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(1,fig)
+
+################################################################
+#########          PANEL 2
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['O3'],f['NO2'],f['NO'],f['ETH']]
+Ltitle = ['O3','NO2','NO','ETH']
+Lminval=[15,      0,    30,    125 ]
+Lmaxval=[25.0,  1000, 1000,    175  ]
+Lstep=[0.1,      20,   20,    0.25 ]
+Lstepticks=[1,   100,  100,   5 ]
+Lfacconv=[1E9,1E12,1E12,1E12    ]
+Lcbarlabel = ['ppb','ppt','ppt','ppt']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20], 
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(2,fig)
+
+################################################################
+#########          PANEL 3
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['CARBO'],f['PHO'],f['SO2'],f['SULF']]
+Ltitle = ['CARBO','PHO','SO2','SULF']
+Lminval=[0,      0,    50,    0 ]
+Lmaxval=[400,  0.7, 1000,    1  ]
+Lstep=[5,      0.01,   10,    0.01 ]
+Lstepticks=[100,   0.1,  100,   0.1 ]
+Lfacconv=[1E12,1E12,1E12,1E12    ]
+Lcbarlabel = ['ppt','ppt','ppt','ppt']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20],
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(3,fig)
+
+
+################################################################
+#########          PANEL 4
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['DMS'],f['CH4'],f['XO2'],f['PAN']]
+Ltitle = ['DMS','CH4','XO2','PAN']
+Lminval=[0,      0,    0.1,    0 ]
+Lmaxval=[300,  0.1, 0.6,       500  ]
+Lstep=[2,      0.001,   0.01,  5 ]
+Lstepticks=[50,   0.01,  0.1,   100 ]
+Lfacconv=[1E12,1E12,1E12,1E12    ]
+Lcbarlabel = ['ppt','ppt','ppt','ppt']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20],
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(4,fig)
+
+################################################################
+#########          PANEL 5
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['DEAERM31C'],f['DEAERM32C'],f['DEAERM31R'],f['DEAERM32R']]
+Ltitle = ['DEAERM31C','DEAERM32C','DEAERM31R','DEAERM32R']
+Lminval=[0,      0,    0,    0 ]
+Lmaxval=[4,  2, 1,    1  ]
+Lstep=[0.005,     ]*4
+Lstepticks=[0.5  ]*4
+Lfacconv=[1E12,1E12,1E12,1E12    ]
+Lcbarlabel = ['ppt','ppt','ppt','ppt']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20],
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(5,fig)
+
+################################################################
+#########          PANEL 6
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['SLTM01'],f['SLTM02'],f['SLTM03'],f['SLTM04']]
+Ltitle = ['SLTM01','SLTM02','SLTM03','SLTM04']
+Lminval=[0]*4
+Lmaxval=[10]*4
+Lstep=[0.01      ]*4
+Lstepticks=[1  ]*4
+Lfacconv=[1E18,1E18,1E18,1E18    ]
+Lcbarlabel = ['1E-6 ppt','1E-6 ppt','1E-6 ppt','1E-6 ppt']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20],
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(6,fig)
+
+################################################################
+#########          PANEL 7
+###############################################################
+Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
+
+Lplot=[f['SLTM05'],f['SLTM06'],f['SLTM07'],f['SLTM08']]
+Ltitle = ['SLTM05','SLTM06','SLTM07','SLTM08']
+Lminval=[0 ]*4
+Lmaxval=[1  ]*4
+Lstep=[0.01  ]*4
+Lstepticks=[0.1  ]*4
+Lfacconv=[1E18,1E21,1E21,1E21    ]
+Lcbarlabel = ['1E-6 ppt','1E-9 ppt','1E-9 ppt','1E-9 ppt']*nb_subplot
+LaddWhite_cm=[True]*len(Lplot)
+Lcolormap = ['gist_rainbow_r']*len(Lplot)
+
+fig = Panel.psectionH(lon=lon, lat=lat, Lvar=Lplot, Llevel=Llvl, Lxlab=Lxlab, Lylab=Lylab, Ltitle=Ltitle, Lminval=Lminval, Lmaxval=Lmaxval, Lcarte=[54.5,56,-22,-20],
+                                Lstep=Lstep, Lstepticks=Lstepticks, Lcolormap=Lcolormap, Lcbarlabel=Lcbarlabel, Lproj=Lprojection, Lfacconv=Lfacconv, LaddWhite_cm=LaddWhite_cm)
+
+Panel.save_graph(7,fig)
+