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View file @ 138fad8a
......@@ -36,6 +36,9 @@ MY_RUN/KTEST/009_ICARTT/001_pgd1/*.asc
MY_RUN/KTEST/009_ICARTT/002_arp2lfi/ecmwf.OD.20040810.18-V2
MY_RUN/KTEST/009_ICARTT/002_arp2lfi/mocage.GLOB22.20040810.18
MY_RUN/KTEST/9??_*
pub/FILEPP/*
!pub/FILEPP/filepp*.tar.gz
!pub/FILEPP/MNH_EXPAND*.tar.gz
pub/ncl-?.?.?
pub/ncl_ncarg*/
src/dir_obj-*
......@@ -49,4 +52,4 @@ src/LIB/libaec*
!src/LIB/libaec*.tar.gz
src/LIB/netcdf*
!src/LIB/netcdf*.tar.gz
vscode_mod/
LIBTOOLS/tools/lfi2cdf/src/mode_util.f90
View file @ 138fad8a
......@@ -1596,7 +1596,7 @@ END DO
USE MODD_IO, ONLY: TFILEDATA
use mode_io_tools_nc4, only: IO_Dim_find_create_nc4, IO_Dim_find_byname_nc4
TYPE(TFILEDATA),INTENT(IN) :: TPFILE
TYPE(TFILEDATA),INTENT(INOUT) :: TPFILE
TYPE(workfield),INTENT(INOUT) :: TPREC
INTEGER, INTENT(OUT) :: KRESP
......
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/001_pgd1/PRE_PGD1.nam 0 → 100644
View file @ 138fad8a
&NAM_CONFZ
NB_PROCIO_W=1 ,
!MPI_BUFFER_SIZE=40
/
&NAM_PGDFILE CPGDFILE="PGD00128" /
&NAM_PGD_SCHEMES CNATURE='ISBA', CSEA='SEAFLX', CTOWN='NONE', CWATER='NONE' /
&NAM_CONF_PROJ XLAT0=-11.5, XLON0=130.7, XRPK=0., XBETA=0. /
&NAM_CONF_PROJ_GRID XLATCEN=-11.5, XLONCEN=130.7, NIMAX=128, NJMAX=128,
XDX=1600.00000, XDY=1600.00000 /
&NAM_COVER YCOVER='ECOCLIMAP_v2.0', YCOVERFILETYPE='DIRECT' /
&NAM_ZS YZS='gtopo30', YZSFILETYPE='DIRECT' /
&NAM_ISBA YCLAY='CLAY_HWSD_MOY', YCLAYFILETYPE='DIRECT',
YSAND='SAND_HWSD_MOY', YSANDFILETYPE='DIRECT' /
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/001_pgd1/get_pgd_files 0 → 100755
View file @ 138fad8a
#
# Modif
# J.Escobar 11/04/2014 get PGD files from 'dir_open' directory ( without psswd )
# J.Escobar 25/04/2013 get LICENCE files
#
PREP_PGD_FILES=${PREP_PGD_FILES:-"$HOME/PREP_PGD_FILES_WWW"} ; export PREP_PGD_FILES
echo "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"
echo "!!!! WARNING !!!!"
echo "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"
echo
echo you need 3GO to download this files in
echo
echo PREP_PGD_FILES=$PREP_PGD_FILES
echo
echo if OK press ENTER else CTRL-C
read RIEN
set -x
mkdir -p $PREP_PGD_FILES
cd $PREP_PGD_FILES
PGD_URL="http://mesonh.aero.obs-mip.fr/mesonh/dir_open/dir_PGDFILES"
WGET="wget"
export PGD_URL
for file in LICENSE_ECOCLIMAP.txt LICENSE_soil_data.txt \
gtopo30.dir gtopo30.hdr \
SAND_HWSD_MOY.hdr SAND_HWSD_MOY.dir CLAY_HWSD_MOY.hdr CLAY_HWSD_MOY.dir \
ECOCLIMAP_v2.0.hdr ECOCLIMAP_v2.0.dir
do
[ -f $file ] || ( ${WGET} -c -nd $PGD_URL/$file.gz ; gunzip $file.gz ; )
done
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/001_pgd1/run_prep_pgd_xyz 0 → 100755
View file @ 138fad8a
#!/bin/bash
export MPIRUN="Mpirun -np 4"
PREP_PGD_FILES=${PREP_PGD_FILES:-"$HOME/PREP_PGD_FILES_WWW"} ; export PREP_PGD_FILES
#
if [ ! -d $PREP_PGD_FILES ]
then
cat << EOF
Your directory PREP_PGD_FILES=$PREP_PGD_FILES
containing the files gtopo30*, ECOCLIMAP_v2.0*
doesn't exist ( or was not found !!! )
use the script 'get_pgd_files' to download
this files from the MESONH WEB PAGES !!!
( or change the variable PREP_PGD_FILES ... )
After fixing it , run this script again !!!
EOF
exit 1
else
set -x
#
rm -f OUTPUT_LISTING0 pipe_name
rm -f gtopo30.??? sand_fao.??? clay_fao.???
rm -f SAND_HWSD_MOY.??? ECOCLIMAP_v2.0.??? ecoclimats_v2.???
rm -f PGD00128.*
#
ln -sf $PREP_PGD_FILES/*.dir $PREP_PGD_FILES/*.hdr .
#
time ${MPIRUN} PREP_PGD${XYZ}
fi
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/002_prep_ideal_case/PRE_IDEA1.nam 0 → 100644
View file @ 138fad8a
&NAM_CONFZ
!NB_PROCIO_R=1 ,
!NB_PROCIO_W=1 ,
!MPI_BUFFER_SIZE=40
/
&NAM_REAL_PGD
CPGD_FILE ="PGD00128" ,
LREAD_ZS =.TRUE., LREAD_GROUND_PARAM =.TRUE.
/
&NAM_DIMn_PRE NIMAX=40, NJMAX=32 /
&NAM_CONF_PRE LCARTESIAN=.FALSE.
CIDEAL='RSOU' CZS='FLAT'
NVERB=0 /
&NAM_CONFn LUSERV= T /
&NAM_LUNITn CINIFILE = "DA0128" , CINIFILEPGD = "PGD00128" /
&NAM_DYNn_PRE
CPRESOPT= 'ZRESI' ,
NITR=4 XRELAX=1. /
&NAM_LBCn_PRE CLBCX= 2*'OPEN' CLBCY= 2*'OPEN' /
&NAM_VPROF_PRE CTYPELOC='IJGRID' NILOC=1 NJLOC=1
CFUNU='ZZZ' CFUNV='ZZZ'
LGEOSBAL=.FALSE. /
&NAM_VER_GRID NKMAX=126, YZGRID_TYPE='FUNCTN',
ZDZGRD=40., ZDZTOP=210., ZZMAX_STRGRD=2500.,
ZSTRGRD=7., ZSTRTOP=7. /
&NAM_GRn_PRE
CSURF='EXTE'
! CSURF='NONE'
/
&NAM_PREP_ISBA XTG_SURF= 311., XTG_ROOT= 303., XTG_DEEP= 302.,
XHUG_SURF= 0.16, XHUG_ROOT= 0.16, XHUG_DEEP= 0.16 /
&NAM_PREP_SEAFLUX XSST_UNIF= 304. /
RSOU
2005 11 30 0
'PUVTHDMR'
0.0000000E+00
100300.0
303.3000
1.9630000E-02
92
100000.0 3.637668 -3.637668
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92800.00 5.801031 -2.111402
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85000.00 0.1345103 -1.537459
81400.00 -0.9020693 -1.849517
71800.00 -2.797467 1.304481
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60500.00 -3.289776 -1.464702
59900.00 -3.208611 -1.634869
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35500.00 2.976104 3.546782
32700.00 4.455215 2.572220
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1000.000 -5.594935 2.608962
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889.9999 1.031246 11.78719
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700.0000 7.487652 -6.282886
600.0000 -4.214078 -2.950729
91
100000.0 303.1000 1.8050000E-02
99900.00 303.1000 1.8040001E-02
99100.00 303.1000 1.7969999E-02
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93000.00 303.0000 1.7370002E-02
92800.00 303.1000 1.6980000E-02
92500.00 303.2000 1.6400000E-02
85000.00 307.1000 1.1190000E-02
81400.00 309.6000 6.6700005E-03
71800.00 312.3000 6.5600001E-03
70000.00 312.9000 6.5400004E-03
60500.00 316.2000 6.1800000E-03
59900.00 318.1000 5.3400006E-03
56900.00 318.7000 4.9899998E-03
55600.00 322.2000 3.3100001E-03
50100.00 325.5000 2.6000000E-03
50000.00 325.5000 2.5800001E-03
49500.00 325.7000 3.1700002E-03
46700.00 328.6000 1.4500001E-03
45300.00 330.1000 9.4000006E-04
44800.00 330.1000 1.9600000E-03
43700.00 331.0000 2.1500003E-03
42200.00 332.2000 1.9400001E-03
41900.00 332.9000 9.6000003E-04
41800.00 333.0000 9.7000005E-04
40000.00 334.2000 1.1600000E-03
39000.00 334.6000 1.0300000E-03
38600.00 335.6000 6.5000000E-04
38300.00 335.8000 6.0000003E-04
35500.00 338.2000 2.5000001E-04
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31400.00 342.0000 5.0000002E-05
30700.00 342.1000 4.0000003E-05
30000.00 342.3000 4.0000003E-05
28800.00 342.3000 1.2000000E-04
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10000.00 365.4000 1.2422363E-06
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7600.000 404.7000 2.3198761E-06
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889.9999 887.3000 2.4844724E-06
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MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/002_prep_ideal_case/run_prep_ideal_xyz 0 → 100755
View file @ 138fad8a
#!/bin/bash
NP=${NP:-16}
NPS=${NPS:-4}
export ACC_DEVICE_TYPE=HOST
export MPIRUN="Mpirun -tag-output -report-bindings --mca mpi_cuda_support 0 -map-by ppr:${NPS}:socket -bind-to none -np ${NP} set_core_device_impair"
#
set -x
set -e
#
rm -f OUTPUT_LISTING1 pipe_name file_for_xtransfer
rm -f PGD00128.*
rm -f DA0128.*
#
ln -sf ../001_pgd1/PGD00128.* .
#
time ${MPIRUN} PREP_IDEAL_CASE${XYZ}
#
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/003_mesonh_step1/EXSEG1.nam 0 → 100644
View file @ 138fad8a
&NAM_CONFZ
! NB_PROCIO_R=1 ,
! NB_PROCIO_W=1 ,
LMNH_MPI_BSEND = F ,
LMNH_MPI_ALLTOALLV_REMAP=T
! MPI_BUFFER_SIZE = 40
/
&NAM_LUNITn CINIFILE = "DA0128" , CINIFILEPGD = "PGD00128" /
&NAM_CONFn LUSERV = T, LUSERC = T, LUSERR = T, LUSERI = T,
LUSERS = T, LUSERG = T, LUSERH = F, LUSECI = T /
&NAM_DYNn XTSTEP = 10.00000 ,
CPRESOPT = "ZRESI", NITR = 12
!CPRESOPT = "ZSOLV", NITR = 12
XRELAX = 1., LHORELAX_UVWTH = T, LHORELAX_RV = T, LVE_RELAX = T,
NRIMX = 6, NRIMY = 6, XRIMKMAX = 0.0005, XT4DIFU = 4000 /
&NAM_ADVn CUVW_ADV_SCHEME = "WENO_K", CMET_ADV_SCHEME = "PPM_01",
CSV_ADV_SCHEME = "PPM_01" /
&NAM_PARAMn CTURB = "TKEL" ! "NONE" ! "TKEL",
CRAD = "ECMW",
CCLOUD = "ICE3" ! "NONE" ! "ICE3",
CDCONV = "NONE", CSCONV = "NONE" /
&NAM_PARAM_ICE
LRED = F
/
&NAM_PARAM_RADn XDTRAD = 1800., XDTRAD_CLONLY = 1800., LCLEAR_SKY = F,
NRAD_COLNBR = 40 /
&NAM_PARAM_MFSHALLn XIMPL_MF = 1, CMF_UPDRAFT = "EDKF", CMF_CLOUD = "NONE",
LMIXUV = T, LMF_FLX = F /
&NAM_LBCn CLBCX = 2*"OPEN", CLBCY = 2*"OPEN", XCPHASE = 20. /
&NAM_TURBn XIMPL = 1., CTURBLEN = "DEAR", CTURBDIM = "3DIM",
LTURB_FLX = F, LTURB_DIAG = F, CSUBG_AUCV = "NONE", LSIGMAS = F,
LSIG_CONV = F, LSUBG_COND = F /
&NAM_CH_MNHCn /
&NAM_CONF CCONF = "START", LFLAT = F, CEQNSYS = "DUR",
LLG=F, NMODEL = 1, NVERB = 0, CEXP = "D0128",
CSEG = "DAR01", CSPLIT = "BSPLITTING"
NHALO=1
/
&NAM_DYN XSEGLEN = 14400.0000 ! 150. ! 14400.0000 , LCORIO = T,
LNUMDIFU = F, LNUMDIFTH = F,
XALKTOP = 0.001, XALZBOT = 22000. /
&NAM_BLANK /
&NAM_NESTING /
&NAM_BACKUP
XBAK_TIME(1,1) = 3600.00000 ! 150. ! 3600.00000
XBAK_TIME(1,2) = 7200.00000
XBAK_TIME(1,3) = 10800.0000
XBAK_TIME(1,4) = 14400.0000
XBAK_TIME(1,5) = 18000.0000
XBAK_TIME(1,6) = 21600.0000
/
&NAM_ISBAn /
&NAM_SEAFLUXn /
&NAM_DIAG_SURFn LSURF_BUDGET=T /
&NAM_DIAG_ISBAn /
&NAM_DIAG_SURF_ATMn /
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/003_mesonh_step1/parameters_mg.nam 0 → 100644
View file @ 138fad8a
! *********************************************************************
! *********************************************************************
! ** **
! ** Parameter file for geometric multigrid code **
! ** **
! *********************************************************************
! *********************************************************************
!
! *********************************************************************
! * General parameters
! *********************************************************************
&parameters_general
savefields = .F. ! Save fields to disk?
/
! *********************************************************************
! * General solver parameters
! *********************************************************************
&parameters_solver
LUseO = F ,
LUseT = T ,
solvertype = 1, ! Solver type:
! 1 : Richardson iteration
! 2 : Conjugate gradient
resreduction = 1e-1 ! 1.0d-10 ! Required relative residual reduction
maxiter = 5 ! 50 ! Maximal number of iterations
/
! *********************************************************************
! * Conjugate gradient parameters
! *********************************************************************
&parameters_conjugategradient
verbose = 10, ! Verbosity level
maxiter = 5, ! Maximal number of iterations
resreduction = 1.0e-1, ! Target residual reduction
n_prec = 1 ! Number of smoother applications in
! preconditioner (N.B.: Using 0 is
! inefficient, as the identity is used
! for preconditioning, instead of using
! unpreconditioned CG.)
/
! *********************************************************************
! * Grid parameters
! *********************************************************************
&parameters_grid
n = 128 , ! 64, ! Number of horizontal grid cells
nz = 72, ! Number of vertical grid cells
L = 204800.0 ! 16000.0 metre * 256 pt grille ! 1.0, ! Size in horizontal direction
H = 19200.0 ! 150.0 metre * 128 niveaux ! 0.01, ! Size in vertical direction
vertbc = 2, ! Boundary conditions at top and bottom of the
! atmosphere. 1 = DIRICHLET, 2 = NEUMANN
! Note that Neumann boundary conditions only work
! for coarsening in the horizontal only, as they are
! not yet implemented in the prolongation operator.
graded = .F. ! Is the grid graded in the vertical direction?
/
! *********************************************************************
! * Parallel communication parameters
! *********************************************************************
&parameters_communication
halo_size = 1 ! Size of halos (has to be 1 or 2)
/
! *********************************************************************
! * Model parameters
! *********************************************************************
!
! parameters of the Helmholtz operator
!
! -omega2*(d^2/dy^2 + d^2/dy^2 + lambda2*d^2/dz^2) u + delta u = RHS
!
&parameters_model
omega2 = 1.0,
lambda2 = 1.0 ! 100.0, ! Vertical coupling
delta = 0.0d0 ! Size of constant term
/
! *********************************************************************
! * Smoother parameters
! *********************************************************************
!
! parameters of the smoother
!
&parameters_smoother
smoother = 6, ! Smoother method
! 3 = line SOR
! 4 = line SSOR
! 6 = line Jacobi
ordering = 2, ! Ordering of grid points (for smoother)
! 1 = lexicographic
! 2 = red-black ordering
!rho = 0.6666666666666666d0 ! Overrelaxation parameter
rho = 0.8d0 ! Overrelaxation parameter
/
! *********************************************************************
! * Multigrid parameters
! *********************************************************************
&parameters_multigrid
verbose = 10, ! Verbosity level
n_lev = 8, ! Number of levels
iswitch_cpu_gpu = 100 ! /!\ =100 deactive switch cpu <-> gpu computation | work only with MANAGED Memory + nvhpc
lev_split = 3, ! First level where data is pulled together
n_presmooth = 1, ! Number of presmoothing steps
n_postsmooth = 1, ! Number of postsmoothing steps
n_coarsegridsmooth = 1, ! Number of smoothing steps on coarsest level
prolongation = 2 ! 2 best after modif !! ! Prologation method
! 1 = constant interpolation
! 2 = (tri-) linear interpolation
restriction = 1, ! Restriction method
! 1 = cell average
! 2 = Khalil
coarsegridsolver = 1 ! Solver on coarsest grid
! 1 = use smoother
! 2 = Conjugate gradient
/
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/003_mesonh_step1/run_mesonh_step1_xyz 0 → 100755
View file @ 138fad8a
#export PGI_ACC_POOL_ALLOC=0
export PGI_ACC_SYNCHRONOUS=1
NP=${NP:-16}
NPS=${NPS:-4}
export MPIRUN=${MPIRUN:-"Mpirun -tag-output -bind-to none -map-by ppr:${NPS}:socket -x PGI_ACC_POOL_ALLOC -x PGI_ACC_SYNCHRONOUS -np ${NP} set_core_device_impair "}
#
set -x
set -e
#
rm -f DA0128.*
rm -f PGD00128.*
rm -f D0128.1.DAR01.* OUTPUT_LISTING* pipe_name
#
ln -sf ../001_pgd1/PGD00128.{des,nc} .
ln -sf ../002_prep_ideal_case/DA0128.{des,nc} .
#
time ${MPIRUN} MESONH${XYZ}
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/EXSEG1.nam 0 → 100644
View file @ 138fad8a
&NAM_CONFIO
LIO_ALLOW_NO_BACKUP = T , LIO_NO_WRITE = T
/
&NAM_CONFZ
! NB_PROCIO_R=1 ,
! NB_PROCIO_W=1 ,
LMNH_MPI_BSEND = F ,
LMNH_MPI_ALLTOALLV_REMAP=T
! MPI_BUFFER_SIZE = 40
!NZ_PROC=1
/
&NAM_LUNITn CINIFILE = "D0128.1.DAR01.004" , CINIFILEPGD = "PGD00128" /
&NAM_CONFn LUSERV = T, LUSERC = T, LUSERR = T, LUSERI = T,
LUSERS = T, LUSERG = T, LUSERH = F, LUSECI = T /
&NAM_DYNn XTSTEP = 10.00000 ,
CPRESOPT = "ZRESI",
!CPRESOPT = "ZSOLV",
NITR = 12,
XRELAX = 1., LHORELAX_UVWTH = T, LHORELAX_RV = T, LVE_RELAX = T,
NRIMX = 6, NRIMY = 6, XRIMKMAX = 0.0005, XT4DIFU = 4000 /
&NAM_ADVn CUVW_ADV_SCHEME = "WENO_K", CMET_ADV_SCHEME = "PPM_01",
CSV_ADV_SCHEME = "PPM_01" /
&NAM_PARAMn CTURB = "TKEL", ! "NONE" , ! "TKEL",
CRAD = "ECMWF",
CCLOUD = "ICE3", ! "NONE" , ! "ICE3",
CDCONV = "NONE", CSCONV = "NONE" /
&NAM_PARAM_ICE
LRED = F
/
&NAM_PARAM_RADn XDTRAD = 1800., XDTRAD_CLONLY = 1800., LCLEAR_SKY = F,
NRAD_COLNBR = 40 /
&NAM_PARAM_MFSHALLn XIMPL_MF = 1, CMF_UPDRAFT = "EDKF", CMF_CLOUD = "NONE",
LMIXUV = T, LMF_FLX = F /
&NAM_LBCn CLBCX = 2*"OPEN", CLBCY = 2*"OPEN", XCPHASE = 20. /
&NAM_TURBn XIMPL = 1., CTURBLEN = "DEAR", CTURBDIM = "3DIM",
LTURB_FLX = F, LTURB_DIAG = F, CSUBG_AUCV = "NONE", LSIGMAS = F,
LSIG_CONV = F, LSUBG_COND = F /
&NAM_CH_MNHCn /
&NAM_CONF CCONF = "RESTA", LFLAT = F, CEQNSYS = "DUR",
LLG=F, NMODEL = 1, NVERB = 0, CEXP = "D0128",
CSEG = "DAR02", CSPLIT = "BSPLITTING"
NHALO=1
LCHECK = F /
&NAM_DYN XSEGLEN = 1000.0 ! 150.0000 ,
LCORIO = T,
LNUMDIFU = F, LNUMDIFTH = F,
XALKTOP = 0.001, XALZBOT = 22000. /
&NAM_BLANK /
&NAM_NESTING /
&NAM_BACKUP
XBAK_TIME(1,1) = 150.0 ! 3600.00000 ! 75. ! 3600.00000
XBAK_TIME(1,2) = 7200.00000
XBAK_TIME(1,3) = 10800.0000
XBAK_TIME(1,4) = 14400.0000
XBAK_TIME(1,5) = 18000.0000
XBAK_TIME(1,6) = 21600.0000
/
&NAM_ISBAn /
&NAM_SEAFLUXn /
&NAM_DIAG_SURFn LSURF_BUDGET=T /
&NAM_DIAG_ISBAn /
&NAM_DIAG_SURF_ATMn /
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/MESONH_HOST2005 0 → 100755
View file @ 138fad8a
#!/bin/bash
export ACC_DEVICE=HOST
ACC_DEVICE_TYPE=${ACC_DEVICE}
exec /home/escj/DEV/MNH-55X-dev-OPENACC-juan-03/src/dir_obj-LXnvhpc2005-R8I4-MNH-V5-4-2-MPIAUTO-${OPTLEVEL}/ZSOLVER/MESONH
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/mppdb.nam 0 → 100644
View file @ 138fad8a
&NAM_MPPDB
MPPDB_DEBUG = .F. ,
MPPDB_NBSON = 1 ,
MPPDB_EXEC = "/home/escj/DEV/MNH-55X-dev-OPENACC-juan-03/MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/MESONH_HOST2005" ,
MPPDB_WDIR = "/home/escj/DEV/MNH-55X-dev-OPENACC-juan-03/MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/dir_clone" ,
MPPDB_CHECK_LB = .F.
/
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/parameters_mg.nam 0 → 100644
View file @ 138fad8a
! *********************************************************************
! *********************************************************************
! ** **
! ** Parameter file for geometric multigrid code **
! ** **
! *********************************************************************
! *********************************************************************
!
! *********************************************************************
! * General parameters
! *********************************************************************
&parameters_general
savefields = .F. ! Save fields to disk?
/
! *********************************************************************
! * General solver parameters
! *********************************************************************
&parameters_solver
LUseO = F ,
LUseT = T ,
solvertype = 1, ! Solver type:
! 1 : Richardson iteration
! 2 : Conjugate gradient
resreduction = 1e-1 ! 1.0d-10 ! Required relative residual reduction
maxiter = 5 ! 50 ! Maximal number of iterations
/
! *********************************************************************
! * Conjugate gradient parameters
! *********************************************************************
&parameters_conjugategradient
verbose = 10, ! Verbosity level
maxiter = 5, ! Maximal number of iterations
resreduction = 1.0e-1, ! Target residual reduction
n_prec = 1 ! Number of smoother applications in
! preconditioner (N.B.: Using 0 is
! inefficient, as the identity is used
! for preconditioning, instead of using
! unpreconditioned CG.)
/
! *********************************************************************
! * Grid parameters
! *********************************************************************
&parameters_grid
n = 128 , ! 64, ! Number of horizontal grid cells
nz = 72, ! Number of vertical grid cells
L = 204800.0 ! 16000.0 metre * 256 pt grille ! 1.0, ! Size in horizontal direction
H = 19200.0 ! 150.0 metre * 128 niveaux ! 0.01, ! Size in vertical direction
vertbc = 2, ! Boundary conditions at top and bottom of the
! atmosphere. 1 = DIRICHLET, 2 = NEUMANN
! Note that Neumann boundary conditions only work
! for coarsening in the horizontal only, as they are
! not yet implemented in the prolongation operator.
graded = .F. ! Is the grid graded in the vertical direction?
/
! *********************************************************************
! * Parallel communication parameters
! *********************************************************************
&parameters_communication
halo_size = 1 ! Size of halos (has to be 1 or 2)
/
! *********************************************************************
! * Model parameters
! *********************************************************************
!
! parameters of the Helmholtz operator
!
! -omega2*(d^2/dy^2 + d^2/dy^2 + lambda2*d^2/dz^2) u + delta u = RHS
!
&parameters_model
omega2 = 1.0,
lambda2 = 1.0 ! 100.0, ! Vertical coupling
delta = 0.0d0 ! Size of constant term
/
! *********************************************************************
! * Smoother parameters
! *********************************************************************
!
! parameters of the smoother
!
&parameters_smoother
smoother = 6, ! Smoother method
! 3 = line SOR
! 4 = line SSOR
! 6 = line Jacobi
ordering = 2, ! Ordering of grid points (for smoother)
! 1 = lexicographic
! 2 = red-black ordering
!rho = 0.6666666666666666d0 ! Overrelaxation parameter
rho = 0.8d0 ! Overrelaxation parameter
/
! *********************************************************************
! * Multigrid parameters
! *********************************************************************
&parameters_multigrid
verbose = 10, ! Verbosity level
n_lev = 8, ! Number of levels
iswitch_cpu_gpu = 100 ! /!\ =100 deactive switch cpu <-> gpu computation | work only with MANAGED Memory + nvhpc
lev_split = 3, ! First level where data is pulled together
n_presmooth = 1, ! Number of presmoothing steps
n_postsmooth = 1, ! Number of postsmoothing steps
n_coarsegridsmooth = 1, ! Number of smoothing steps on coarsest level
prolongation = 2 ! 2 best after modif !! ! Prologation method
! 1 = constant interpolation
! 2 = (tri-) linear interpolation
restriction = 1, ! Restriction method
! 1 = cell average
! 2 = Khalil
coarsegridsolver = 1 ! Solver on coarsest grid
! 1 = use smoother
! 2 = Conjugate gradient
/
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/run_mesonh_step2_xyz 0 → 100755
View file @ 138fad8a
#!/bin/bash
#
#
set -x
#export PGI_ACC_POOL_ALLOC=0
export PGI_ACC_SYNCHRONOUS=1
#export NVCOMPILER_ACC_POOL_ALLOC=0
NP=${NP:-16}
NPS=${NPS:-4}
export MPIRUN=${MPIRUN:-"Mpirun -tag-output -report-bindings -bind-to none -map-by ppr:${NPS}:socket -x NVCOMPILER_ACC_POOL_ALLOC_MAXSIZE -x NVCOMPILER_ACC_POOL_ALLOC -x PGI_ACC_POOL_ALLOC -x PGI_ACC_SYNCHRONOUS -np ${NP} set_core_device_impair "}
rm -f DA0128.*
rm -f PGD00128.*
rm -f D0128.1.DAR0?.* OUTPUT_LISTING1 pipe_name
#
ln -sf ../001_pgd1/PGD00128.* .
ln -sf ../002_prep_ideal_case/DA0128.* .
ln -sf ../003_mesonh_step1/D0128.1.DAR0?.* .
#
time ${MPIRUN} MESONH${XYZ}
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/004_mesonh_step2/run_mesonh_step2_xyz_mppdb 0 → 100755
View file @ 138fad8a
#!/bin/bash
#
#
set -x
DIRCLONE=dir_clone
mkdir -p ${DIRCLONE}
export PGI_ACC_POOL_ALLOC=0
#export PGI_ACC_POOL_SIZE=100MB
export NP=${NP:-1}
export MPIRUN=${MPIRUN:-Mpirun -tag-output -np ${NP}}
#export PGI_ACC_NOTIFY=$(( 1+2+4+8+16+32 )) PGI_ACC_DEBUG=$(( 1+2+4+8+16+32 ))
#export PGI_ACC_TIME=1
export PGI_ACC_SYNCHRONOUS=1
(
cd ${DIRCLONE}
#
rm -f DA0128.*
rm -f PGD00128.*
rm -f D0128.1.DAR0?.* OUTPUT_LISTING1 pipe_name
#
cp ../EXSEG1.nam .
ln -sf ../../001_pgd1/PGD00128.* .
ln -sf ../../002_prep_ideal_case/DA0128.* .
ln -sf ../../003_mesonh_step1/D0128.1.DAR01.* .
#
)
#
rm -f DA0128.*
rm -f PGD00128.*
rm -f D0128.1.DAR0?.* OUTPUT_LISTING1 pipe_name
#
ln -sf ../001_pgd1/PGD00128.* .
ln -sf ../002_prep_ideal_case/DA0128.* .
ln -sf ../003_mesonh_step1/D0128.1.DAR0?.* .
#
killall -r 'MESONH.*'
time ${MPIRUN} MESONH${XYZ}
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/005_mg_main_mnh_all/parameters_mg.nam 0 → 120000
View file @ 138fad8a
../004_mesonh_step2/parameters_mg.nam
\ No newline at end of file
MY_RUN/BENCH/CINES_MNH55X/004_Hector_128x128_MNH-55X/005_mg_main_mnh_all/run_mg_main_mnh_all_xyz 0 → 100755
View file @ 138fad8a
#!/bin/bash
#
#
set -x
#export PGI_ACC_POOL_ALLOC=0
export PGI_ACC_SYNCHRONOUS=1
#export NVCOMPILER_ACC_POOL_ALLOC=0
NP=${NP:-16}
NPS=${NPS:-4}
export MPIRUN=${MPIRUN:-"Mpirun -tag-output -report-bindings -bind-to none -map-by ppr:${NPS}:socket -x NVCOMPILER_ACC_POOL_ALLOC_MAXSIZE -x NVCOMPILER_ACC_POOL_ALLOC -x PGI_ACC_POOL_ALLOC -x PGI_ACC_SYNCHRONOUS -np ${NP} set_core_device_impair "}
time ${MPIRUN} MG_MAIN_MNH_ALL${XYZ}
MY_RUN/BENCH/CINES_MNH55X/004_Hector_256x256_MNH-55X/001_pgd1/PRE_PGD1.nam 0 → 100644
View file @ 138fad8a
&NAM_CONFZ
NB_PROCIO_W=1 ,
!MPI_BUFFER_SIZE=40
/
&NAM_PGDFILE CPGDFILE="PGD00256" /
&NAM_PGD_SCHEMES CNATURE='ISBA', CSEA='SEAFLX', CTOWN='NONE', CWATER='NONE' /
&NAM_CONF_PROJ XLAT0=-11.5, XLON0=130.7, XRPK=0., XBETA=0. /
&NAM_CONF_PROJ_GRID XLATCEN=-11.5, XLONCEN=130.7, NIMAX=256, NJMAX=256,
XDX=800.00000, XDY=800.00000 /
&NAM_COVER YCOVER='ECOCLIMAP_v2.0', YCOVERFILETYPE='DIRECT' /
&NAM_ZS YZS='gtopo30', YZSFILETYPE='DIRECT' /
&NAM_ISBA YCLAY='CLAY_HWSD_MOY', YCLAYFILETYPE='DIRECT',
YSAND='SAND_HWSD_MOY', YSANDFILETYPE='DIRECT' /
MY_RUN/BENCH/CINES_MNH55X/004_Hector_256x256_MNH-55X/001_pgd1/get_pgd_files 0 → 100755
View file @ 138fad8a
#
# Modif
# J.Escobar 11/04/2014 get PGD files from 'dir_open' directory ( without psswd )
# J.Escobar 25/04/2013 get LICENCE files
#
PREP_PGD_FILES=${PREP_PGD_FILES:-"$HOME/PREP_PGD_FILES_WWW"} ; export PREP_PGD_FILES
echo "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"
echo "!!!! WARNING !!!!"
echo "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!"
echo
echo you need 3GO to download this files in
echo
echo PREP_PGD_FILES=$PREP_PGD_FILES
echo
echo if OK press ENTER else CTRL-C
read RIEN
set -x
mkdir -p $PREP_PGD_FILES
cd $PREP_PGD_FILES
PGD_URL="http://mesonh.aero.obs-mip.fr/mesonh/dir_open/dir_PGDFILES"
WGET="wget"
export PGD_URL
for file in LICENSE_ECOCLIMAP.txt LICENSE_soil_data.txt \
gtopo30.dir gtopo30.hdr \
SAND_HWSD_MOY.hdr SAND_HWSD_MOY.dir CLAY_HWSD_MOY.hdr CLAY_HWSD_MOY.dir \
ECOCLIMAP_v2.0.hdr ECOCLIMAP_v2.0.dir
do
[ -f $file ] || ( ${WGET} -c -nd $PGD_URL/$file.gz ; gunzip $file.gz ; )
done

Documentation | Mentions légales | CGU | Accessibilité : non conforme