small update

README.md

@@ -11,8 +11,8 @@ Features:
   * reads parsing and valitation
   * reads feature extraction
   * demultiplexing into separate fastq files
-* Unique Molecule Identifiers (UMI)
 * Wrapper for mapping and quantification of 5'-end or 3'-end of mapped reads 
+  * Unique Molecule Identifiers (UMI)
 * Post-processing of count table
   * filtering and normalisation
 * Downstream analysis
@@ -22,10 +22,10 @@ Features:
   * Differential proportion statistical analysis
 
 Applications:
-* TSS identification → tuto
-* Endoribonucleolytic cleavage sites identification → tuto
-* co-translational degradation
-* post-transcriptional modification & differential proportion analysis → [tuto](scripts/Post-transcriptional.modifications.and.differential.proportion.analysis.Xu-2023.ipynb)
+* TSS identification → [notebpok](scripts/TSS.identification.Prados-2016.ipynb]
+* Endoribonucleolytic cleavage sites identification → [notebpok](scripts/Endoribonucleolytic.cleavage.sites.identification.Broglia-2020.ipynb]
+* co-translational degradation → [notebpok](scripts/Co-translational.exoribonucleolytic.degradation.Khemici-2015.ipynb]
+* post-transcriptional modification & differential proportion analysis → [notebpok](scripts/Post-transcriptional.modifications.and.differential.proportion.analysis.Xu-2023.ipynb)
 
 ## Installation
 
@@ -53,3 +53,5 @@ We recommend the use a [mamba](https://mamba.readthedocs.io/) (or conda) environ
 
 * Roland Barriot
 * Tomas Caetano
+* Gwennaele Fichant
+* Peter Redder