Juan 01/04/2020:For Irene-fr/Skylake/Knl, update configure to use oenmpi/2.0.4

A-INSTALL

@@ -602,12 +602,12 @@ sbatch job_make_examples_BullX_occigen
 #   but with a commun disk space , connect to : 
 #
 #   - ssh irene-fr  : for Intel SkyLake/KNL processors
-#      On Intel processors the MPI use is INTELMPI
+#      On Intel processors the MPI use is OPENMPI/2.0.4
 #      the configure will generate a
-#      profile_mesonh-LXifort-R8I4-MNH-V5-4-3-MPIINTEL-O2
+#      profile_mesonh-LXifort-R8I4-MNH-V5-4-3-MPIAUTO-O2
 #
 #   - ssh irene-amd : for AMD , processors
-#      On AMD processors the MPI use is OPENMPI
+#      On AMD processors the MPI use is OPENMPI/4.02
 #      the configure will generate a
 #      profile_mesonh-LXifort-R8I4-MNH-V5-4-3-AMD-MPIAUTO-O2
 # 
@@ -616,8 +616,14 @@ sbatch job_make_examples_BullX_occigen
 #
 
 #   - to run the test case examples  run
+#
+# On intel Skylake
+ccc_msub job_make_examples_BullX_irene
+# On intel Knl 
+ccc_msub -q knl job_make_examples_BullX_irene
 
-ccc_msub job_make_examples_BullX_irene{_AMD}
+# On intel AMD 
+ccc_msub job_make_examples_BullX_irene_AMD
 
 # 
 #   at ECMWF on cca ( CRAY/XC30 ) :

src/configure

@@ -123,16 +123,15 @@ module load ncl_ncarg/6.3.0
 *Intel*) # Irene Intel core
                 export MNH_ARCH=`echo $ARCH | grep LX`
                 export     ARCH=${MNH_ARCH:-LXifort}
-                export  VER_MPI=${VER_MPI:-MPIINTEL}
+                export  VER_MPI=${VER_MPI:-MPIAUTO}
                 export OPTLEVEL=${OPTLEVEL:-O2}
                 export MVWORK=${MVWORK:-NO}
 		export VER_CDF=${VER_CDF:-CDFAUTO}
                 export MNHENV=${MNHENV:-"
 module purge
 module load intel/18.0.3.222
-module load mpi/intelmpi/2018.0.3.222
+module load mpi/openmpi/2.0.4
 export SLURM_CPU_BIND=none
-export I_MPI_PIN_PROCESSOR_LIST=all:map=spread
 "}
 ;;
 *AMD*) # Irene AMD core
@@ -147,6 +146,7 @@ export I_MPI_PIN_PROCESSOR_LIST=all:map=spread
 module purge
 module load intel/19.0.5.281 
 module load mpi/openmpi/4.0.2
+export SLURM_CPU_BIND=none
 # Set some openmpi variable for pb with nb of cores >> 1024
 export OMPI_MCA_coll_hcoll_enable=0
 export HCOLL_ENABLE_MCAST_ALL=0

src/job_make_examples_BullX_irene

 #!/bin/bash
 #MSUB -J Examples
 #MSUB -N 2            # nodes number
-#MSUB -n 4            # CPUs number (on all nodes) 
-#MSUB --exclusive           
+#MSUB -n 4            # CPUs number (on all nodes)         
 #MSUB -o Examples.eo%j   #
 #MSUB -e Examples.eo%j   #
 #MSUB -T 3600        # time limit
@@ -11,6 +10,7 @@
 #MSUB -x #  exclusive usage of nodes
 #MSUB -X # enable X forwarding -> force 'ccc_msub -i ' to get it work
 #MSUB -q skylake
+##MSUB -q knl
 
 # Echo des commandes
 ulimit -c 0
@@ -21,14 +21,14 @@ set +x
 # Nom de la machine
 hostname 
 
-. ../conf/profile_mesonh-LXifort-R8I4-MNH-V5-4-3-MPIINTEL-O2
+. ../conf/profile_mesonh-LXifort-R8I4-MNH-V5-4-3-MPIAUTO-O2
 
 set -x
 
 module list
 
-export MONORUN="Exec ccc_mprun -n 1 "
-export MPIRUN="Exec ccc_mprun -n 4 "
+export MONORUN="Mpirun -tag-output --report-bindings -np 1 "
+export MPIRUN="Mpirun -tag-output --report-bindings -np 4 "
 export POSTRUN="echo "
 
 cd $SRC_MESONH/MY_RUN/KTEST/003_KW78