Quentin 07/08/2024: HPC test cases multiple adaptation for 571:

- CSEG length now  more than 5 characters allowed: adapt plot and pre-steps link and file names
- BACKUP files at time=0 not possible any more
- fix some variables name to plot (the ending 'T' is removed)

MY_RUN/INTEGRATION_CASES/HPC/MEGAN/EUROPE/005_mesonh_tst4/EXSEG1.nam

@@ -2,14 +2,16 @@
             NB_PROCIO_R=1 , NB_PROCIO_W=1,
             LMNH_MPI_BSEND = F, LMNH_MPI_ALLTOALLV_REMAP = T /
 &NAM_CONFIO LCDF4 = T /
-&NAM_CONF  CCONF = "START", NVERB=10, NMODEL = 1,
+&NAM_CONF  CCONF = "START", NVERB=2, NMODEL = 1,
             CEXP = "CHARM", CSEG = "SEG01" ,
             CSPLIT="BSPLITTING",NHALO=3 /
 &NAM_DYN  XSEGLEN = 3600., LCORIO = T, LNUMDIFU = F,
            XALKTOP = 0.005, XALZBOT = 14000. /
-&NAM_LUNITn  CINIFILE = "CPLCHE20140630.00",CINIFILEPGD="CHARMEX0714_PGD_50km"
+&NAM_LUNITn  CINIFILE = "CPLCHE20140630.00",CINIFILEPGD="CHARMEX0714_PGD_50km", 
+             CCPLFILE(1) = "CPLCHE20140630.06" /
+
 /
-&NAM_DYNn  XTSTEP = 15.,
+&NAM_DYNn  XTSTEP = 60.,
            CPRESOPT = "ZRESI",
            NITR = 8,
            LHORELAX_UVWTH = T, LHORELAX_RV = T, LVE_RELAX = T,
@@ -62,7 +64,7 @@
                 CMINERAL = "EQSAM",
                 CORGANIC    = "MPMPO",
                 CNUCLEATION = "MAATTANEN_NEUTRAL"  /
-&NAM_BACKUP XBAK_TIME(1,1) = 20., XBAK_TIME(1,2) = 3600. XBAK_TIME(1,3) = 21600.,XBAK_TIME(1,4) = 43200/
+&NAM_BACKUP XBAK_TIME(1,1) = 3600 /
 &NAM_DIAG_SURFn N2M = 0, LSURF_BUDGET = F /
 &NAM_ISBA CALBEDO="DRY" /
 &NAM_ISBAn CSCOND="NP89", 
@@ -87,4 +89,4 @@
 &NAM_BLANK /
 
 &NAM_NEBn LSUBG_COND = F  /
-&NAM_PARAM_ICEn CSUBG_AUCV_RC = "CLFR" /
+&NAM_PARAM_ICEn CSUBG_AUCV_RC = "CLFR" /
\ No newline at end of file

MY_RUN/INTEGRATION_CASES/HPC/MEGAN/EUROPE/005_mesonh_tst4/run_mesonh.sh

 #!/bin/sh
 #SBATCH -J run_megan1
 #SBATCH -N 1            # nodes number (=NBP)
-#SBATCH -n 1            # CPUs number (on all nodes) (=NBP*TPN)
+#SBATCH -n 4            # CPUs number (on all nodes) (=NBP*TPN)
 #SBATCH -o run_megan.eo%j   #
 #SBATCH -e run_megan.eo%j   #
-#SBATCH -t 03:00:00    # time limit
+#SBATCH -t 05:00:00    # time limit
 # Echo des commandes
 ulimit -c 0
 ulimit -s unlimited
@@ -15,7 +15,7 @@ hostname
 
 
 . ~/DEV_57/MNH-PHYEX070-b95d84d7/conf/profile_mesonh-LXifort-R8I4-MNH-V5-6-2-ECRAD140-MPIAUTO-O2-RELACS
-export MPIRUN="Mpirun -np 1"
+export MPIRUN="Mpirun -np 4"
 
 set -x
 set -e

MY_RUN/INTEGRATION_CASES/HPC/MEGAN/EUROPE/006_plot/plot_MEGAN.py

@@ -18,7 +18,7 @@ except:
 import os
 
 Lpath=["../005_mesonh_tst1/","../005_mesonh_tst2/","../005_mesonh_tst3/","../005_mesonh_tst4/"]
-LnameFiles=['CHARM.1.SEG01.002.nc']*4
+LnameFiles=['CHARM.1.SEG01.001.nc']*4
 
 variables=['CO','O3','NO2','NO','ISOP','BIOL','HCHO','BIOH','latitude','longitude']
 Dvar_input = {'f1': variables,'f2': variables,'f3': variables,'f4': variables}

MY_RUN/INTEGRATION_CASES/HPC/MEGAN/REUNION_DMS/006_mesonh_283TO3003/EXSEG1.nam

@@ -162,7 +162,7 @@
 
 &NAM_SEAFLUXn CSEA_ALB="TA96", LPRECIP = T /
 
-&NAM_CH_SURFn    LCH_SURF_EMIS=T /
+&NAM_CH_SURFn    LCH_SURF_EMIS=T, LCH_DMSEMIS=T /
 
 &NAM_CH_CONTROLn CCHEM_SURF_FILE= "ReLACS_MACCity_aero.nam" /
 
@@ -187,4 +187,4 @@
 &NAM_BLANK /
 
 &NAM_NEBn LSIGMAS=T, LSUBG_COND=F  /
-&NAM_PARAM_ICEn CSUBG_AUCV_RC='NONE'/
+&NAM_PARAM_ICEn CSUBG_AUCV_RC='NONE'/
\ No newline at end of file

MY_RUN/INTEGRATION_CASES/HPC/MEGAN/REUNION_DMS/PYTHON/plot_MEGAN_REUNION.py

@@ -20,10 +20,10 @@ import os
 Lpath=["../006_mesonh_283TO3003/"]
 LnameFiles=['A2830.1.MEGAD.006.nc']
 
-variables=['COT','O3T','NO2T','NOT','BIOPT','HCHOT','BIOT','latitude','longitude',
-           'ETHT', 'CARBOT','PHOT','SO2T','SULFT','DMST','CH4T','XO2T','PANT',
-           'DEAERM31CT','DEAERM32CT','DEAERM31RT','DEAERM32RT',
-           'SLTM01T','SLTM02T','SLTM03T','SLTM04T','SLTM05T','SLTM06T','SLTM07T','SLTM08T']
+variables=['CO','O3','NO2','NO','BIOP','HCHO','BIO','latitude','longitude',
+           'ETH', 'CARBO','PHO','SO2','SULF','DMS','CH4','XO2','PAN',
+           'DEAERM31C','DEAERM32C','DEAERM31R','DEAERM32R',
+           'SLTM01','SLTM02','SLTM03','SLTM04','SLTM05','SLTM06','SLTM07','SLTM08']
 Dvar_input = {'f1': variables}
 
 #  Read the variables in the files
@@ -47,8 +47,8 @@ Llvl = [0]*nb_subplot
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['BIOPT'],f['BIOT'],f['COT'],f['HCHOT']]
-Ltitle = ['BIOPT','BIOT','COT','HCHOT']
+Lplot=[f['BIOP'],f['BIO'],f['CO'],f['HCHO']]
+Ltitle = ['BIOP','BIO','CO','HCHO']
 Lminval=[0,      0,    30,    0.001 ]
 Lmaxval=[15.0,  1000, 110,    1  ]
 Lstep=[0.25,      20,   2,    0.04 ]
@@ -68,8 +68,8 @@ Panel.save_graph(1,fig)
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['O3T'],f['NO2T'],f['NOT'],f['ETHT']]
-Ltitle = ['O3T','NO2T','NOT','ETHT']
+Lplot=[f['O3'],f['NO2'],f['NO'],f['ETH']]
+Ltitle = ['O3','NO2','NO','ETH']
 Lminval=[15,      0,    30,    125 ]
 Lmaxval=[25.0,  1000, 1000,    175  ]
 Lstep=[0.1,      20,   20,    0.25 ]
@@ -89,8 +89,8 @@ Panel.save_graph(2,fig)
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['CARBOT'],f['PHOT'],f['SO2T'],f['SULFT']]
-Ltitle = ['CARBOT','PHOT','SO2T','SULFT']
+Lplot=[f['CARBO'],f['PHO'],f['SO2'],f['SULF']]
+Ltitle = ['CARBO','PHO','SO2','SULF']
 Lminval=[0,      0,    50,    0 ]
 Lmaxval=[400,  0.7, 1000,    1  ]
 Lstep=[5,      0.01,   10,    0.01 ]
@@ -111,8 +111,8 @@ Panel.save_graph(3,fig)
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['DMST'],f['CH4T'],f['XO2T'],f['PANT']]
-Ltitle = ['DMST','CH4T','XO2T','PANT']
+Lplot=[f['DMS'],f['CH4'],f['XO2'],f['PAN']]
+Ltitle = ['DMS','CH4','XO2','PAN']
 Lminval=[0,      0,    0.1,    0 ]
 Lmaxval=[300,  0.1, 0.6,       500  ]
 Lstep=[2,      0.001,   0.01,  5 ]
@@ -132,8 +132,8 @@ Panel.save_graph(4,fig)
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['DEAERM31CT'],f['DEAERM32CT'],f['DEAERM31RT'],f['DEAERM32RT']]
-Ltitle = ['DEAERM31CT','DEAERM32CT','DEAERM31RT','DEAERM32RT']
+Lplot=[f['DEAERM31C'],f['DEAERM32C'],f['DEAERM31R'],f['DEAERM32R']]
+Ltitle = ['DEAERM31C','DEAERM32C','DEAERM31R','DEAERM32R']
 Lminval=[0,      0,    0,    0 ]
 Lmaxval=[4,  2, 1,    1  ]
 Lstep=[0.005,     ]*4
@@ -153,8 +153,8 @@ Panel.save_graph(5,fig)
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['SLTM01T'],f['SLTM02T'],f['SLTM03T'],f['SLTM04T']]
-Ltitle = ['SLTM01T','SLTM02T','SLTM03T','SLTM04T']
+Lplot=[f['SLTM01'],f['SLTM02'],f['SLTM03'],f['SLTM04']]
+Ltitle = ['SLTM01','SLTM02','SLTM03','SLTM04']
 Lminval=[0]*4
 Lmaxval=[10]*4
 Lstep=[0.01      ]*4
@@ -174,8 +174,8 @@ Panel.save_graph(6,fig)
 ###############################################################
 Panel = PanelPlot(2,2, [20,20],'KTEST MEGAN Reunion K=0', minmaxpad=1.05)
 
-Lplot=[f['SLTM05T'],f['SLTM06T'],f['SLTM07T'],f['SLTM08T']]
-Ltitle = ['SLTM05T','SLTM06T','SLTM07T','SLTM08T']
+Lplot=[f['SLTM05'],f['SLTM06'],f['SLTM07'],f['SLTM08']]
+Ltitle = ['SLTM05','SLTM06','SLTM07','SLTM08']
 Lminval=[0 ]*4
 Lmaxval=[1  ]*4
 Lstep=[0.01  ]*4

MY_RUN/INTEGRATION_CASES/HPC/OCEAN_LES/002_run1/EXSEG1.nam

@@ -21,7 +21,7 @@
 &NAM_DYN XSEGLEN=3600.,    
           LCORIO=T,
           LNUMDIFU=T /
-&NAM_BACKUP XBAK_TIME(1,1)=10.,XBAK_TIME(1,2)=3600.,XBAK_TIME(1,3)=43200.,XBAK_TIME(1,4)=86400./
+&NAM_BACKUP XBAK_TIME(1,1)=30.,XBAK_TIME(1,2)=3600.,XBAK_TIME(1,3)=43200.,XBAK_TIME(1,4)=86400./
 &NAM_CONFZ
 !   NZ_VERB=5 , NZ_PROC=0 , NB_PROCIO_R=2 , NB_PROCIO_W=2
 /

MY_RUN/INTEGRATION_CASES/HPC/OCEAN_LES/004_run2/EXSEG1.nam

@@ -19,7 +19,7 @@
            NMODEL=2,
            NVERB=10, 
            CEQNSYS='LHE',
-           CEXP="SPWAN0",
+           CEXP="SPWAN",
            CSEG="25m00",
            LFORCING=F,
            NHALO=1 /

MY_RUN/INTEGRATION_CASES/HPC/STERAO/RUN/EXSEG1.nam

-&NAM_CONFIO LCDF4=T LLFIOUT=T LLFIREAD=T /
+&NAM_CONFIO LCDF4=T LLFIOUT=F LLFIREAD=F /
 &NAM_LUNITn  CINIFILE = "STERAO_LARGE" /
 &NAM_DYNn    XTSTEP = 2.5,
              CPRESOPT = "ZRESI",

MY_RUN/INTEGRATION_CASES/HPC/STERAO/RUN/PRE_IDEA1.nam

-&NAM_CONFIO LCDF4=T LLFIOUT=T LLFIREAD=T /
+&NAM_CONFIO LCDF4=T LLFIOUT=F LLFIREAD=F /
 &NAM_DIMn_PRE NIMAX=160 NJMAX=160 /
 &NAM_CONF_PRE LCARTESIAN=.TRUE.
 	      CIDEAL='RSOU' CZS='FLAT' 

MY_RUN/INTEGRATION_CASES/HPC/STERAO/RUN/run_mesonh

@@ -34,11 +34,3 @@ mv OUTPUT_LISTING1  OUTPUT_LISTING1_run
 ls -lrt
 
 rm -f file_for_xtransfer pipe_name PRESSURE REMAP*
-ls -lrt
-mkdir OUTPUT
-mv OUTPUT_L* OUTPUT
-mkdir LFI
-mv *.lfi LFI/.
-mv *.des LFI/.
-
-ja