Quentin 07/08/2024: HPC test cases multiple adaptation for 571:

- CSEG length now  more than 5 characters allowed: adapt plot and pre-steps link and file names
- BACKUP files at time=0 not possible any more
- fix some variables name to plot (the ending 'T' is removed)

MY_RUN/INTEGRATION_CASES/HPC/16JAN/RUN/EXSEG1.nam_run1

@@ -18,7 +18,7 @@
 &NAM_TURBn CTURBLEN = "BL89", CTURBDIM = "1DIM",
            LTURB_DIAG = F, LTURB_FLX = F /
 &NAM_CONF CCONF = "START", NMODEL = 1, NVERB = 5,
-           CEXP = "16JA1v ", CSEG = "WENO5",NHALO=3 /
+           CEXP = "16JA1 ", CSEG = "WENO5",NHALO=3 /
 &NAM_DYN  XSEGLEN = 43200., LCORIO = T, LNUMDIFU = F,LNUMDIFTH = F,
           XALKTOP = 0.001, XALZBOT = 15000. /
 &NAM_BACKUP XBAK_TIME(1,1)=10800., XBAK_TIME(1,2)=21600.,XBAK_TIME(1,3)=32400.,XBAK_TIME(1,4)=43200./

MY_RUN/INTEGRATION_CASES/HPC/16JAN/RUN/run_diag

@@ -39,12 +39,4 @@ mv OUTPUT_LISTING1  OUTPUT_LISTING1_diag2
 
 rm -f DIAG1.nam
 rm -f file_for_xtransfer pipe_name
-ls -lrt
-mkdir OUTPUT
-mv OUTPUT_L* OUTPUT
-mkdir LFI
-mv *.lfi LFI/.
-mv *.des LFI/.
-mkdir NETCDF
-mv *.nc NETCDF
 ja

MY_RUN/INTEGRATION_CASES/HPC/ARMCU_LES/DEAR/run_mesonh

@@ -34,15 +34,5 @@ ls -lrt
 
 rm -f file_for_xtransfer pipe_name PRESSURE REMAP*
 
-ls -lrt 
-mkdir OUTPUT
-mv OUTPUT_L* OUTPUT
-mkdir LFI
-mv *.lfi LFI/.
-mv *.des LFI/.
-mkdir NETCDF
-mv *.nc NETCDF/.
-ja
-
 cd ../PYTHON
 sbatch run_python

MY_RUN/INTEGRATION_CASES/HPC/ARMCU_LES/HM21/run_mesonh

@@ -34,15 +34,5 @@ ls -lrt
 
 rm -f file_for_xtransfer pipe_name PRESSURE REMAP*
 
-ls -lrt 
-mkdir OUTPUT
-mv OUTPUT_L* OUTPUT
-mkdir LFI
-mv *.lfi LFI/.
-mv *.des LFI/.
-mkdir NETCDF
-mv *.nc NETCDF/.
-ja
-
 cd ../PYTHON
 sbatch run_python

MY_RUN/INTEGRATION_CASES/HPC/CHARMEX/NCL/plot_chem_06.ncl

@@ -8,7 +8,7 @@ begin
 ; open file and read in data
 ;=================================================;
 
-  a = addfile("../RUN/OUTFILES/CHARM.1.SEG02.004.nc", "r")
+  a = addfile("../RUN/OUTFILES/CHARM.1.SEG02.003.nc", "r")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values

MY_RUN/INTEGRATION_CASES/HPC/CHARMEX/NCL/plot_chem_12.ncl

@@ -8,7 +8,7 @@ begin
 ; open file and read in data
 ;=================================================;
 
-  a = addfile("../RUN/OUTFILES/CHARM.1.SEG02.010.nc", "r")
+  a = addfile("../RUN/OUTFILES/CHARM.1.SEG02.009.nc", "r")
 ;=================================================;
 ; Get informations on variable sizes
 ; dims are dims-2 to remove non-physical values

MY_RUN/INTEGRATION_CASES/HPC/CHARMEX/RUN/EXSEG1.nam_dom1

@@ -2,7 +2,7 @@
 &NAM_CONFZ  NZ_VERB=5 , NZ_PROC=0 , MPI_BUFFER_SIZE=50, 
             NB_PROCIO_R=1 , NB_PROCIO_W=1,
             LMNH_MPI_BSEND = F, LMNH_MPI_ALLTOALLV_REMAP = T /
-&NAM_CONF  CCONF = "START", NVERB=10, NMODEL = 1,
+&NAM_CONF  CCONF = "START", NVERB=2, NMODEL = 1,
             CEXP = "CHARM", CSEG = "SEG01" ,
             CSPLIT="BSPLITTING",NHALO=3 /
 &NAM_DYN  XSEGLEN = 43200., LCORIO = T, LNUMDIFU = F,

MY_RUN/INTEGRATION_CASES/HPC/CHARMEX/RUN/EXSEG1.nam_dom2

@@ -2,7 +2,7 @@
 &NAM_CONFZ  NZ_VERB=5 , NZ_PROC=0 , MPI_BUFFER_SIZE=50, 
             NB_PROCIO_R=1 , NB_PROCIO_W=1,
             LMNH_MPI_BSEND = F, LMNH_MPI_ALLTOALLV_REMAP = T /
-&NAM_CONF  CCONF = "START", NVERB=5, NMODEL = 1,
+&NAM_CONF  CCONF = "START", NVERB=2, NMODEL = 1,
             CEXP = "CHARM", CSEG = "SEG02" ,
             CSPLIT="BSPLITTING",NHALO=3 /
 &NAM_DYN  XSEGLEN = 32400., LCORIO = T, LNUMDIFU = F,

MY_RUN/INTEGRATION_CASES/HPC/DUST/PYTHON/plot_DUST.py

@@ -17,7 +17,7 @@ os.system('rm -f tempgraph*')
 #
 path=""
 
-LnameFiles = ['DUST7.1.W5_S3.009.nc']
+LnameFiles = ['DUST7.1.W5_S3.008.nc']
 
 Dvar_input = {'f1':['F_DST001P1','F_DST002P1','F_DST003P1', 'latitude', 'longitude', 'time']}
 

MY_RUN/INTEGRATION_CASES/HPC/DUST/PYTHON/run_python

@@ -18,6 +18,6 @@ ln -sf ${SRC_MESONH}/src/LIB/Python/* .
 module purge
 module load python/3.7.6
 
-ln -sf ../RUN/DUST7.1.W5_S3.009.nc .
+ln -sf ../RUN/DUST7.1.W5_S3.008.nc .
 python3 plot_DUST.py
 convert *.png DUST.pdf

MY_RUN/INTEGRATION_CASES/HPC/DUST/RUN/EXSEG1.nam.2

 &NAM_CONFIO LCDF4=T LLFIOUT=F LLFIREAD=F /
- &NAM_LUNITn CINIFILE = "DUST7.1.W5_S1.009" ,CINIFILEPGD="pgd_shade",
+ &NAM_LUNITn CINIFILE = "DUST7.1.W5_S1.008" ,CINIFILEPGD="pgd_shade",
             CCPLFILE(1) = "S7020000925.06",     CCPLFILE(2) = "S7020000925.12",     CCPLFILE(3) = "S7020000925.18",     CCPLFILE(4) = "S7020000926.00" /
  &NAM_DYNn  XTSTEP = 120.,  CPRESOPT = "ZRESI", NITR = 12, LITRADJ=T,
             XRELAX = 1., LHORELAX_UVWTH = T, LHORELAX_RV = T, LVE_RELAX = T,

MY_RUN/INTEGRATION_CASES/HPC/DUST/RUN/EXSEG1.nam.3

 &NAM_CONFIO LCDF4=T LLFIOUT=F LLFIREAD=F /
- &NAM_LUNITn CINIFILE = "DUST7.1.W5_S2.009" ,CINIFILEPGD="pgd_shade",
+ &NAM_LUNITn CINIFILE = "DUST7.1.W5_S2.008" ,CINIFILEPGD="pgd_shade",
             CCPLFILE(1) = "S7020000926.06",     CCPLFILE(2) = "S7020000926.12",     CCPLFILE(3) = "S7020000926.18",     CCPLFILE(4) = "S7020000927.00" /
  &NAM_DYNn  XTSTEP = 120.,  CPRESOPT = "ZRESI", NITR = 12, LITRADJ=T,
             XRELAX = 1., LHORELAX_UVWTH = T, LHORELAX_RV = T, LVE_RELAX = T,

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/02-1WT_and_Nest/04_RUN_EOL/EXSEG1.nam

-&NAM_LUNITn  CINIFILE    = "FIRE_.1.SEG1.003",
+&NAM_LUNITn  CINIFILE    = "FIRE_.1.SEG1.002",
              CINIFILEPGD = "FIRE_PGD"/  
 
 &NAM_CONFIO  LCDF4            = T,

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/02-1WT_and_Nest/04_RUN_EOL/EXSEG2.nam

-&NAM_LUNITn  CINIFILE    = "FIRE_.2.SEG1.003",
+&NAM_LUNITn  CINIFILE    = "FIRE_.2.SEG1.002",
              CINIFILEPGD = "FIRE_INI.spa00"/  
 
 &NAM_DYNn    XTSTEP      = 1,

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/02-1WT_and_Nest/04_RUN_EOL/run_mesonh

@@ -22,8 +22,8 @@ set -e
 
 ln -sf ../01_PREP/FIRE_* .
 ln -sf ../02_SPAWN/FIRE_INI.spa* .
-ln -sf ../03_RUN_PRE/FIRE_.1.SEG1.003* .
-ln -sf ../03_RUN_PRE/FIRE_.2.SEG1.003* .
+ln -sf ../03_RUN_PRE/FIRE_.1.SEG1.002* .
+ln -sf ../03_RUN_PRE/FIRE_.2.SEG1.002* .
 
 time ${MPIRUN} MESONH${XYZ}
 

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/03-2WT_Pre_and_Nest/03_SPAWN/SPAWN1.nam

@@ -13,7 +13,7 @@
 /
 
 &NAM_LUNIT2_SPA 
-   CINIFILE    = 'DADDY.1.SEG1.003',
+   CINIFILE    = 'DADDY.1.SEG1.002',
    CINIFILEPGD = 'DAD_PGD',
    YSPANBR     = '00',
    YSPAFILE    = 'SON_INInPGD',

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/03-2WT_Pre_and_Nest/03_SPAWN/run_spawn

@@ -22,11 +22,11 @@ set -e
 export MPIRUN="mpirun -np 1"
 
 ln -sf ../01_PREP/DAD* .
-ln -sf ../02_RUN_PERE/DADDY.1.SEG1.003.* .
+ln -sf ../02_RUN_PERE/DADDY.1.SEG1.002.* .
 
 time ${MPIRUN} SPAWNING${XYZ}
 
-sed -i 's/DADDY.1.SEG1.003/SON_INInPGD/g' SON_INInPGD.des
+sed -i 's/DADDY.1.SEG1.002/SON_INInPGD/g' SON_INInPGD.des
 sed -i 's/CINIFILEPGD     = "/CINIFILEPGD="SON_INInPGD/g' SON_INInPGD.des
 
 

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/03-2WT_Pre_and_Nest/04_RUN_PRE/EXSEG1.nam

-&NAM_LUNITn  CINIFILE    = "DADDY.1.SEG1.003",
+&NAM_LUNITn  CINIFILE    = "DADDY.1.SEG1.002",
              CINIFILEPGD = "DAD_PGD"/  
 
 &NAM_CONFIO  LCDF4            = T,

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/03-2WT_Pre_and_Nest/04_RUN_PRE/run_mesonh

@@ -21,7 +21,7 @@ set -x
 set -e
 
 ln -sf ../01_PREP/DAD_PGD* .
-ln -sf ../02_RUN_PERE/DADDY.1.SEG1.003.* .
+ln -sf ../02_RUN_PERE/DADDY.1.SEG1.002.* .
 ln -sf ../03_SPAWN/SON* .
 
 time ${MPIRUN} MESONH${XYZ}

MY_RUN/INTEGRATION_CASES/HPC/EOLIENNE/ADNR/03-2WT_Pre_and_Nest/05_RUN_EOL/EXSEG1.nam

-&NAM_LUNITn  CINIFILE    = "RUN_P.1.SEG1.003",
+&NAM_LUNITn  CINIFILE    = "RUN_PRE.1.SEG1.002",
              CINIFILEPGD = "DAD_PGD"/  
 
 &NAM_CONFIO  LCDF4            = T,