Quentin 07/07/2022: turb, LDIAG_IN_RUN and XCURRENT_TKE_DISS moved outside of turb (passing as args)

Documentation updated with the inclusion of the tools
Selection of subdirectories to include during copy of repository in check_commit_* scripts
 - to limit volume
 - to reduce the risk of having a broken symlink (that could happen in the build directory)
Missing quotes in prep_code

Possibility added to build a fcm configuration file from a gmkpack file

Inclusion of configuration file for belenos/taranis and CTI computers

No WHERE statement in mnh_expand_array bloc
Closing brackets for directives

Quentin 20/06/2022: bugfix, missing add arguments in call turb of optionnal PTR and PDISS for mesonh

Quentin 17/06/2022: add KTEST 007_16janvier/turb3D and COLD_BUBBLE + adapt compare and check for 2D simulations

Move some codes from arome specific directory to the common one
Hack FCM to build a shared lib
Compilation of fiat through FCM

Mechanism and external dependencies (fiat) seem OK
Some modules are missing to enable the compilation

For GPU, ice4_nucleation cannot be put in an include file
as included subroutine must not contain local variables.